RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CPA1P15085 419 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 CDK7P50613 346 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 RCAN1P53805 252 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 CCDC62Q6P9F0 684 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 BRF1Q92994 677 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 TRIM43Q96BQ3 446 aaPredicted RBP12.91□□□□□ -0.34
RFFL-204ENST00000414419 MTG1Q9BT17 334 aaPredicted RBP12.91□□□□□ -0.34
RFFL-204ENST00000414419 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 A6NJR5 290 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 ARIH2O95376 493 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
RFFL-204ENST00000414419 PSMC6P62333 389 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
RFFL-204ENST00000414419 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
RFFL-204ENST00000414419 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
RFFL-204ENST00000414419 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.34
RFFL-204ENST00000414419 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
RFFL-204ENST00000414419 STAM2O75886 525 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 SLC34A2O95436 690 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
RFFL-204ENST00000414419 LAMC2Q13753 1193 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 GNPTABQ3T906 1256 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 FAM126BQ8IXS8 530 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 AFG1LQ8WV93 481 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
RFFL-204ENST00000414419 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
RFFL-204ENST00000414419 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 MEIS2O14770 477 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 TIMP1P01033 207 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 MMP3P08254 477 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 TGFB3P10600 412 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 NAPAP54920 295 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 FPGSQ05932 587 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 DGKDQ16760 1214 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
RFFL-204ENST00000414419 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 GPKOWQ92917 476 aaPredicted RBP eCLIP12.88□□□□□ -0.35
RFFL-204ENST00000414419 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
RFFL-204ENST00000414419 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
RFFL-204ENST00000414419 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 RGS20O76081 388 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 CD4P01730 458 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 CDC27P30260 824 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
RFFL-204ENST00000414419 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
RFFL-204ENST00000414419 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 NLRX1Q86UT6 975 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 TBX21Q9UL17 535 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
RFFL-204ENST00000414419 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 SORBS3O60504 671 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 B4GALT4O60513 344 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 GGPS1O95749 300 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 ITGB8P26012 769 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 ADCY7P51828 1080 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
RFFL-204ENST00000414419 NEDD9Q14511 834 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 UBE2SQ16763 222 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
RFFL-204ENST00000414419 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 WWC2Q6AWC2 1192 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 MFSD5Q6N075 450 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 EMID1Q96A84 441 aaPredicted RBP12.86□□□□□ -0.35
RFFL-204ENST00000414419 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
RFFL-204ENST00000414419 TM6SF1Q9BZW5 370 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms