RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 PPP2R3AQ06190 1150 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 LRRC32Q14392 662 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 ARID5BQ14865 1188 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 PTPN14Q15678 1187 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 CFAP58Q5T655 872 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 PPP1R26Q5T8A7 1209 aaPredicted RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 TMEM214Q6NUQ4 689 aaKnown RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 LLGL2Q6P1M3 1020 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 NLRC3Q7RTR2 1065 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 LRRN4CLQ8ND94 238 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 PTPRN2Q92932 1015 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 HPS3Q969F9 1004 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 SNX21Q969T3 373 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 TRIM44Q96DX7 344 aaPredicted RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 KLRG1Q96E93 195 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 LTV1Q96GA3 475 aaPredicted RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 TEKT5Q96M29 485 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 NT5C1BQ96P26 610 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 PPP1R16BQ96T49 567 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 OSMRQ99650 979 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 ZKSCAN3Q9BRR0 538 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 ANP32EQ9BTT0 268 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 BHMT2Q9H2M3 363 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 ZNF576Q9H609 170 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 VPS45Q9NRW7 570 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 MARK1Q9P0L2 795 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 GMIPQ9P107 970 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 STAP2Q9UGK3 403 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 XPO7Q9UIA9 1087 aaKnown RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 RABL2BQ9UNT1 228 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 VPS9D1Q9Y2B5 631 aa6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 GPC6Q9Y625 555 aaPredicted RBP6.74□□□□□ -1.33
CBX1P3-201ENST00000413296 B4DLN1 442 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 MASP2O00187 686 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 CBX4O00257 560 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 TUSC2O75896 110 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 TBX18O95935 607 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 DNTTP04053 509 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ATF7P17544 494 aaPredicted RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 MX2P20592 715 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 NME2P22392 152 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 GTF2E1P29083 439 aaPredicted RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ZNF157P51786 506 aaPredicted RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 MLLT1Q03111 559 aaPredicted RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ACAP2Q15057 778 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 CLUL1Q15846 466 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 RFX8Q6ZV50 586 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 RTL10Q7L3V2 364 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 DDX53Q86TM3 631 aaKnown RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 NRSN1Q8IZ57 195 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 KRT78Q8N1N4 520 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ESX1Q8N693 406 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 CLRN3Q8NCR9 226 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 MSANTD4Q8NCY6 345 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 OR8H1Q8NGG4 311 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 PPP1R35Q8TAP8 253 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ZSCAN18Q8TBC5 510 aaPredicted RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ARL8AQ96BM9 186 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 HIC2Q96JB3 615 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 GSX2Q9BZM3 304 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 NUP62CLQ9H1M0 184 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 TMEM60Q9H2L4 133 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 WASH6PQ9NQA3 447 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 DISC1Q9NRI5 854 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 PDRG1Q9NUG6 133 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 IRAK4Q9NWZ3 460 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 EPS15L1Q9UBC2 864 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ZNF112Q9UJU3 913 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 PA2G4Q9UQ80 394 aaKnown RBP6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 ZKSCAN5Q9Y2L8 839 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 PRR36Q9H6K5 1346 aa6.73□□□□□ -1.33
CBX1P3-201ENST00000413296 A0A096LPE4 126 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 A0A1W2PPZ6 126 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 P4HA2O15460 535 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 HTATSF1O43719 755 aaKnown RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 AHCYL1O43865 530 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 SOD2P04179 222 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 AKR1B1P15121 316 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 MUTP22033 750 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 PEX2P28328 305 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 POLR2BP30876 1174 aaKnown RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 ATP6V1E1P36543 226 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 TECP42680 631 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 ARL4CP56559 192 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 PPP2R5DQ14738 602 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 SLC14A2Q15849 920 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 DDB1Q16531 1140 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms