RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RSPH10B2B2RC85 870 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 LOC730098B7Z3J9 87 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 PROB1E7EW31 1015 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 C5orf67F2Z3F1 127 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 H0Y858 1186 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 NFIBO00712 420 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 KDM4AO75164 1064 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 UPP2O95045 317 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 GH1P01241 217 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 APPP05067 770 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ICAM1P05362 532 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLC3A2P08195 630 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 MMP3P08254 477 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 RSPH10BP0C881 870 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATP5JP18859 108 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 GNAT2P19087 354 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 EDNRBP24530 442 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CALML3P27482 149 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CTNNB1P35222 781 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ID4P47928 161 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TDO2P48775 406 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 NDUFV1P49821 464 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 SNAP25P60880 206 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZXDAP98168 799 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TFAP4Q01664 338 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 DLX2Q07687 328 aaPredicted RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 HYAL1Q12794 435 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 DGKDQ16760 1214 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 KIAA0753Q2KHM9 967 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TCTN1Q2MV58 587 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CTC1Q2NKJ3 1217 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRIM71Q2Q1W2 868 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLFNL1Q499Z3 407 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF618Q5T7W0 954 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CEP85Q6P2H3 762 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CCDC62Q6P9F0 684 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRAF7Q6Q0C0 670 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 RNF207Q6ZRF8 634 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 KCTD1Q719H9 257 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ITPRIPQ8IWB1 547 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 DHX37Q8IY37 1157 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 FTSJ3Q8IY81 847 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 DNERQ8NFT8 737 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 AFG1LQ8WV93 481 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 SEPT8Q92599 483 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 KAT2BQ92831 832 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TOP1MTQ969P6 601 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 IL17RAQ96F46 866 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CTAGE1Q96RT6 745 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 STRBPQ96SI9 672 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 HAUS7Q99871 368 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ALG1Q9BT22 464 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 FSD1Q9BTV5 496 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 KATNAL1Q9BW62 490 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 IFIH1Q9BYX4 1025 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 NACAP1Q9BZK3 213 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 LMAN2LQ9H0V9 348 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 BCL11AQ9H165 835 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 IGFLR1Q9H665 355 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TLR9Q9NR96 1032 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 HDAC6Q9UBN7 1215 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 GTF2IRD1Q9UHL9 959 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 CD207Q9UJ71 328 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 STX8Q9UNK0 236 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TNNQ9UQP3 1299 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRPC6Q9Y210 931 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 RWDD3Q9Y3V2 267 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 MYH1P12882 1939 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 WDFY4Q6ZS81 3184 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CNOT1A5YKK6 2376 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 OTOGLQ3ZCN5 2332 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 C17orf102A2RUQ5 167 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PRR23AA6NEV1 266 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 TSPY2A6NKD2 308 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PATL2C9JE40 543 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 GRM6O15303 877 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 GALR2O43603 387 aaPredicted RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RAB11FIP3O75154 756 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CAND2O75155 1236 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 HMMRO75330 724 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 TBX10O75333 385 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPFIA4O75335 1185 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ARIH2O95376 493 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 EYA4O95677 639 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 F2P00734 622 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MMP1P03956 469 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CHGBP05060 677 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZFYP08048 801 aaPredicted RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ICAM3P32942 547 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLC16A2P36021 539 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 BMPR1AP36894 532 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 THPOP40225 353 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 NBL1P41271 181 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PSEN2P49810 448 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 VCPP55072 806 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RRP1P56182 461 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RPS6P62753 249 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ARHGAP1Q07960 439 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 COASYQ13057 564 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MKRN4PQ13434 485 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms