RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NHLH1Q02575 133 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 SEPT14Q6ZU15 432 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 TOMM22Q9NS69 142 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 HDAC6Q9UBN7 1215 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 GTF2IRD1Q9UHL9 959 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 DCXO43602 365 aa19.62■□□□□ 0.73
CHMP3-203ENST00000409225 CASTP20810 708 aaKnown RBP19.62■□□□□ 0.73
CHMP3-203ENST00000409225 ARHGAP1Q07960 439 aa19.62■□□□□ 0.73
CHMP3-203ENST00000409225 CCDC62Q6P9F0 684 aa19.62■□□□□ 0.73
CHMP3-203ENST00000409225 C7orf31Q8N865 590 aa19.62■□□□□ 0.73
CHMP3-203ENST00000409225 PNMA2Q9UL42 364 aa19.62■□□□□ 0.73
CHMP3-203ENST00000409225 ORC4O43929 436 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 PSEN2P49810 448 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 PUS10Q3MIT2 529 aaKnown RBP19.61■□□□□ 0.73
CHMP3-203ENST00000409225 USH1GQ495M9 461 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 RRP12Q5JTH9 1297 aaKnown RBP19.61■□□□□ 0.73
CHMP3-203ENST00000409225 ZNF618Q5T7W0 954 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.61■□□□□ 0.731e-9■■■■□ 20.2
CHMP3-203ENST00000409225 EP400NLQ6ZTU2 488 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 NEK9Q8TD19 979 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 MRPL38Q96DV4 380 aaKnown RBP19.61■□□□□ 0.73
CHMP3-203ENST00000409225 FBXL18Q96ME1 805 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 INSL6Q9Y581 213 aa19.61■□□□□ 0.73
CHMP3-203ENST00000409225 WDR19Q8NEZ3 1342 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 PDHBP11177 359 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 PTK7Q13308 1070 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 MBTPS1Q14703 1052 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 DGKDQ16760 1214 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 PTPROQ16827 1216 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 TRAF7Q6Q0C0 670 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 MYOCDQ8IZQ8 938 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 WNT8BQ93098 351 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 ANAPC4Q9UJX5 808 aa19.6■□□□□ 0.73
CHMP3-203ENST00000409225 LGR5O75473 907 aa19.59■□□□□ 0.73
CHMP3-203ENST00000409225 ZNF200P98182 395 aaPredicted RBP19.59■□□□□ 0.73
CHMP3-203ENST00000409225 TRIM71Q2Q1W2 868 aaKnown RBP19.59■□□□□ 0.73
CHMP3-203ENST00000409225 VPS53Q5VIR6 699 aa19.59■□□□□ 0.73
CHMP3-203ENST00000409225 DCTPP1Q9H773 170 aa19.59■□□□□ 0.73
CHMP3-203ENST00000409225 CTNNA3Q9UI47 895 aa19.59■□□□□ 0.73
CHMP3-203ENST00000409225 TTC41PQ6P2S7 1318 aa19.58■□□□□ 0.73
CHMP3-203ENST00000409225 AMHP03971 560 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 ZNF286BP0CG31 522 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 ZNF543Q08ER8 600 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 MFSD10Q14728 455 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 KIAA0753Q2KHM9 967 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 EPC2Q52LR7 807 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 TIGD5Q53EQ6 642 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 PI4K2BQ8TCG2 481 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 TBC1D5Q92609 795 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 TAAR1Q96RJ0 339 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 KATNAL1Q9BW62 490 aa19.58■□□□□ 0.72
CHMP3-203ENST00000409225 POTEB3A0JP26 581 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 FGRP09769 529 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 HTRA4P83105 476 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-203ENST00000409225 ZP2Q05996 745 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 TCEAL5Q5H9L2 206 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 C20orf194Q5TEA3 1177 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 POTEBQ6S5H4 581 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 BANK1Q8NDB2 785 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 RGS22Q8NE09 1264 aa19.57■□□□□ 0.72
CHMP3-203ENST00000409225 OTUD7AQ8TE49 926 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-203ENST00000409225 GPM6BQ13491 265 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 STXBP2Q15833 593 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 DBF4BQ8NFT6 615 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 SP7Q8TDD2 431 aaPredicted RBP19.56■□□□□ 0.72
CHMP3-203ENST00000409225 SYTL5Q8TDW5 730 aaPredicted RBP19.56■□□□□ 0.72
CHMP3-203ENST00000409225 NSUN6Q8TEA1 469 aaKnown RBP19.56■□□□□ 0.72
CHMP3-203ENST00000409225 ANKS1AQ92625 1134 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 PABPC5Q96DU9 382 aaKnown RBP19.56■□□□□ 0.72
CHMP3-203ENST00000409225 KCNH6Q9H252 994 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 TCP11L1Q9NUJ3 509 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 COL20A1Q9P218 1284 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 DDX41Q9UJV9 622 aaKnown RBP19.56■□□□□ 0.72
CHMP3-203ENST00000409225 FAM50BQ9Y247 325 aa19.56■□□□□ 0.72
CHMP3-203ENST00000409225 EMSYQ7Z589 1322 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 HAS3O00219 553 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 F2P00734 622 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 GOLGA8HP0CJ92 632 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 HFE2Q6ZVN8 426 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
CHMP3-203ENST00000409225 SAMD11Q96NU1 681 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 YME1L1Q96TA2 773 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 PRKAG3Q9UGI9 489 aa19.55■□□□□ 0.72
CHMP3-203ENST00000409225 MICAL3Q7RTP6 2002 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 RSPH10B2B2RC85 870 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 H3BNC9 293 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 RSPH10BP0C881 870 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 THPOP40225 353 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
CHMP3-203ENST00000409225 HIC1Q14526 733 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 ADHFE1Q8IWW8 467 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 PPTC7Q8NI37 304 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 EMID1Q96A84 441 aaPredicted RBP19.54■□□□□ 0.72
CHMP3-203ENST00000409225 RMDN3Q96TC7 470 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 UBA5Q9GZZ9 404 aa19.54■□□□□ 0.72
CHMP3-203ENST00000409225 NSUN3Q9H649 340 aaKnown RBP19.54■□□□□ 0.72
CHMP3-203ENST00000409225 CLDND1Q9NY35 253 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms