RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MMP10P09238 476 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
NUP50-203ENST00000407019 BRD3Q15059 726 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 MAN2A1Q16706 1144 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CCDC122Q5T0U0 273 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 TSG101Q99816 390 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 NHEJ1Q9H9Q4 299 aaPredicted RBP18.73■□□□□ 0.59
NUP50-203ENST00000407019 NYAP2Q9P242 653 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 MYO6Q9UM54 1294 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 PCDHA12Q9UN75 941 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CTAGE15A4D2H0 777 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 EIF3CLB5ME19 914 aaKnown RBP18.73■□□□□ 0.59
NUP50-203ENST00000407019 CTAGE8P0CG41 777 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 SLC1A4P43007 532 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CACNB3P54284 484 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CDK17Q00537 523 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 TCP10Q12799 353 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 ECM1Q16610 540 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 HYIQ5T013 277 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 FOXR2Q6PJQ5 311 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CTAGE6Q86UF2 777 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 KIAA0825Q8IV33 1275 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 CTAGE4Q8IX94 777 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 MKL1Q969V6 931 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 JAKMIP2Q96AA8 810 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 EIF3CQ99613 913 aaKnown RBP18.73■□□□□ 0.59
NUP50-203ENST00000407019 MRIQ9BWK5 157 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 NDST4Q9H3R1 872 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 ANKZF1Q9H8Y5 726 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 KANSL2Q9H9L4 492 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 ST7Q9NRC1 585 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 FAM196BA6NMK8 535 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 NKRFO15226 690 aaKnown RBP eCLIP18.72■□□□□ 0.59
NUP50-203ENST00000407019 FKBP1AP62942 108 aaKnown RBP18.72■□□□□ 0.59
NUP50-203ENST00000407019 TERF2Q15554 542 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
NUP50-203ENST00000407019 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
NUP50-203ENST00000407019 SLFN13Q68D06 897 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 ZNF622Q969S3 477 aaKnown RBP eCLIP18.72■□□□□ 0.59
NUP50-203ENST00000407019 IDI2Q9BXS1 227 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 KCNQ5Q9NR82 932 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 SIPA1L1O43166 1804 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 DDTLA6NHG4 134 aaPredicted RBP18.72■□□□□ 0.59
NUP50-203ENST00000407019 KRT86O43790 486 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 COASYQ13057 564 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 STRIP1Q5VSL9 837 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 LRRC55Q6ZSA7 311 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 GJA10Q969M2 543 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 DNAJC19Q96DA6 116 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 ANO3Q9BYT9 981 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 SIK3Q9Y2K2 1263 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 PCDHAC2Q9Y5I4 1007 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 EP400Q96L91 3159 aa18.72■□□□□ 0.59
NUP50-203ENST00000407019 MYH7BA7E2Y1 1941 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L15C9J2P7 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L11C9JVI0 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L18D6R9N7 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L22D6RA61 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L19D6RCP7 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L20D6RJB6 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.59
NUP50-203ENST00000407019 HDLBPQ00341 1268 aaKnown RBP18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L24Q0WX57 530 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 MYOCDQ8IZQ8 938 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 FAM198AQ9UFP1 575 aa18.71■□□□□ 0.59
NUP50-203ENST00000407019 SLC26A4O43511 780 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 SASH3O75995 380 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 TFRCP02786 760 aaKnown RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 USP11P51784 963 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 LRRC41Q15345 812 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 TRAPPC11Q7Z392 1133 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 BMP2KQ9NSY1 1161 aaPredicted RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 PANK4Q9NVE7 773 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 TFR2Q9UP52 801 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 HNRNPH3P31942 346 aaKnown RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 AP3B2Q13367 1082 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 SHROOM1Q2M3G4 852 aaPredicted RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 FAM26FQ5R3K3 315 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 DACT2Q5SW24 774 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 ZNF771Q7L3S4 317 aaPredicted RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 CCDC84Q86UT8 332 aaPredicted RBP18.7■□□□□ 0.58
NUP50-203ENST00000407019 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 KCNMB3Q9NPA1 279 aa18.7■□□□□ 0.58
NUP50-203ENST00000407019 ECE2O60344 883 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 SSBP05455 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
NUP50-203ENST00000407019 ICA1Q05084 483 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 LONRF2Q1L5Z9 754 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 TMEM179Q6ZVK1 233 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms