RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 MYH1P12882 1939 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-211ENST00000399355 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
ITSN1-211ENST00000399355 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
ITSN1-211ENST00000399355 PRR16Q569H4 304 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-211ENST00000399355 CDK5RAP3Q96JB5 506 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-211ENST00000399355 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.312e-7■■■■■ 27.2
ITSN1-211ENST00000399355 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 SEMA3EO15041 775 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 LMAN1P49257 510 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 APOBEC3HQ6NTF7 200 aaKnown RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 SRGAP1Q7Z6B7 1085 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 CLIC2O15247 247 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 RASSF7Q02833 373 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 AOC3Q16853 763 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 CYP26C1Q6V0L0 522 aa13.08□□□□□ -0.32
ITSN1-211ENST00000399355 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
ITSN1-211ENST00000399355 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 SLC1A4P43007 532 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 TDRD12Q587J7 1177 aaKnown RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 LARP4BQ92615 738 aaKnown RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 MYO6Q9UM54 1294 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 TRAF5O00463 557 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 MED24O75448 989 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 FTCDO95954 541 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 ADCY7P51828 1080 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 TCP10L2B9ZVM9 353 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 RCAN1P53805 252 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 JAKMIP2Q96AA8 810 aa13.07□□□□□ -0.32
ITSN1-211ENST00000399355 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
ITSN1-211ENST00000399355 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 LRRC10BA6NIK2 292 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 TISP43B9A030 160 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
ITSN1-211ENST00000399355 SIAH1Q8IUQ4 282 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 FBXO28Q9NVF7 368 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 LAMB1P07942 1786 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 TPM1P09493 284 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 PPP4CP60510 307 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 PPP2R5BQ15173 497 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
ITSN1-211ENST00000399355 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
ITSN1-211ENST00000399355 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 BEND6Q5SZJ8 279 aaPredicted RBP13.06□□□□□ -0.32
ITSN1-211ENST00000399355 CCDC174Q6PII3 467 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 ACER1Q8TDN7 264 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 CTAGE1Q96RT6 745 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 PSTPIP2Q9H939 334 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 FAM53CQ9NYF3 392 aa13.06□□□□□ -0.32
ITSN1-211ENST00000399355 RAD17O75943 681 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 KCNJ6P48051 423 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 CASP4P49662 377 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 NAV1Q8NEY1 1877 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 PDS5AQ29RF7 1337 aaKnown RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 FAM86B1E9PN63 330 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 H7C1D1 291 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 FAM86B2P0C5J1 330 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 IL1R1P14778 569 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 AMPD2Q01433 879 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 COG2Q14746 738 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 SV2BQ7L1I2 683 aa13.05□□□□□ -0.32
ITSN1-211ENST00000399355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.05□□□□□ -0.32
ITSN1-211ENST00000399355 TTYH3Q9C0H2 523 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms