RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FBXO16Q8IX29 292 aaPredicted RBP20.21■□□□□ 0.83
CTNS-203ENST00000399306 BLIDQ8IZY5 108 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 AIFM3Q96NN9 605 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 INPP4AQ96PE3 977 aaPredicted RBP20.21■□□□□ 0.83
CTNS-203ENST00000399306 ANO3Q9BYT9 981 aa20.21■□□□□ 0.83
CTNS-203ENST00000399306 MAFGO15525 162 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 CYP3A4P08684 503 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 ICAM3P32942 547 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 TNFAIP2Q03169 654 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 TRIM29Q14134 588 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 DUSP28Q4G0W2 176 aa20.2■□□□□ 0.82
CTNS-203ENST00000399306 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
CTNS-203ENST00000399306 GNEQ9Y223 722 aaKnown RBP20.2■□□□□ 0.82
CTNS-203ENST00000399306 K7ELQ4 463 aaPredicted RBP20.19■□□□□ 0.82
CTNS-203ENST00000399306 MRPS9P82933 396 aaKnown RBP20.19■□□□□ 0.82
CTNS-203ENST00000399306 CCDC62Q6P9F0 684 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 FAM184AQ8NB25 1140 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 ARRDC4Q8NCT1 418 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 IL31RAQ8NI17 732 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 CRYGNQ8WXF5 182 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 WDR11Q9BZH6 1224 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 UPF3AQ9H1J1 476 aaKnown RBP20.19■□□□□ 0.82
CTNS-203ENST00000399306 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 BRCA2P51587 3418 aa20.19■□□□□ 0.82
CTNS-203ENST00000399306 MYH7BA7E2Y1 1941 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 RGS20O76081 388 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 TFRCP02786 760 aaKnown RBP20.18■□□□□ 0.82
CTNS-203ENST00000399306 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
CTNS-203ENST00000399306 CST5P28325 142 aaPredicted RBP20.18■□□□□ 0.82
CTNS-203ENST00000399306 GJA9P57773 515 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 EEPD1Q7L9B9 569 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 NIPA1Q7RTP0 329 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 NLRX1Q86UT6 975 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 GPRASP2Q96D09 838 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 SPC25Q9HBM1 224 aa20.18■□□□□ 0.82
CTNS-203ENST00000399306 POTEFA5A3E0 1075 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 MYCP01106 439 aaPredicted RBP20.17■□□□□ 0.82
CTNS-203ENST00000399306 MMP1P03956 469 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 ADCYAP1R1P41586 468 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 USP11P51784 963 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 ARHGAP4P98171 946 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 JAKMIP3Q5VZ66 844 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 KRT25Q7Z3Z0 450 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 RNF180Q86T96 592 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 FBXO18Q8NFZ0 1043 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 C8orf76Q96K31 380 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 SENP7Q9BQF6 1050 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 XPNPEP3Q9NQH7 507 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 PDGFCQ9NRA1 345 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 UBIAD1Q9Y5Z9 338 aa20.17■□□□□ 0.82
CTNS-203ENST00000399306 FIBPO43427 364 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 ADAMTS4O75173 837 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 SMPD1P17405 629 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 CIITAP33076 1130 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 KRT40Q6A162 431 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 EMID1Q96A84 441 aaPredicted RBP20.16■□□□□ 0.82
CTNS-203ENST00000399306 TSEN34Q9BSV6 310 aaKnown RBP20.16■□□□□ 0.82
CTNS-203ENST00000399306 TMEM260Q9NX78 707 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 DDX41Q9UJV9 622 aaKnown RBP20.16■□□□□ 0.82
CTNS-203ENST00000399306 KCNJ14Q9UNX9 436 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
CTNS-203ENST00000399306 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
CTNS-203ENST00000399306 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.15■□□□□ 0.82
CTNS-203ENST00000399306 SPATA31C2B4DYI2 1134 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 DNM1LO00429 736 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 TXNP10599 105 aaKnown RBP20.15■□□□□ 0.82
CTNS-203ENST00000399306 KRT2P35908 639 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 RGS19P49795 217 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 SAFBQ15424 915 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTNS-203ENST00000399306 CEP55Q53EZ4 464 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 MOXD1Q6UVY6 613 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 UBE2Q1Q7Z7E8 422 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 HSCBQ8IWL3 235 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 GIMAP8Q8ND71 665 aaPredicted RBP20.15■□□□□ 0.82
CTNS-203ENST00000399306 KLHDC9Q8NEP7 349 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 AP5M1Q9H0R1 490 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 JADE2Q9NQC1 790 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 MRVI1Q9Y6F6 885 aa20.15■□□□□ 0.82
CTNS-203ENST00000399306 SYNRGQ9UMZ2 1314 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 MEIS1O00470 390 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 ADCY6O43306 1168 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 EN2P19622 333 aaPredicted RBP20.14■□□□□ 0.81
CTNS-203ENST00000399306 NONOQ15233 471 aaKnown RBP eCLIP20.14■□□□□ 0.81
CTNS-203ENST00000399306 LRRC41Q15345 812 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 TLK2Q86UE8 772 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 NAP1L4Q99733 375 aaKnown RBP20.14■□□□□ 0.81
CTNS-203ENST00000399306 MXRA8Q9BRK3 442 aa20.14■□□□□ 0.81
CTNS-203ENST00000399306 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 ADAMTS3O15072 1205 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 GH1P01241 217 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 ITGB5P18084 799 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 GJB2P29033 226 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 SOX10P56693 466 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 SETQ01105 290 aaPredicted RBP20.13■□□□□ 0.81
CTNS-203ENST00000399306 NEDD9Q14511 834 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 BRDTQ58F21 947 aaPredicted RBP20.13■□□□□ 0.81
CTNS-203ENST00000399306 PCSK9Q8NBP7 692 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms