RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZCCHC17Q9NP64 241 aaKnown RBP31.12■■■□□ 2.57
CPNE1-203ENST00000397442 KCNH3Q9ULD8 1083 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 PFASO15067 1338 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 ZNF76P36508 570 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 TXKP42681 527 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 ZSCAN23Q3MJ62 389 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 ANKRD35Q8N283 1001 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 SHCBP1Q8NEM2 672 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 GJA10Q969M2 543 aa31.11■■■□□ 2.57
CPNE1-203ENST00000397442 FXR2P51116 673 aaKnown RBP eCLIP31.1■■■□□ 2.572e-6■■■□□ 18.4
CPNE1-203ENST00000397442 INHBEP58166 350 aa31.1■■■□□ 2.57
CPNE1-203ENST00000397442 MRPS9P82933 396 aaKnown RBP31.1■■■□□ 2.57
CPNE1-203ENST00000397442 CEP55Q53EZ4 464 aa31.1■■■□□ 2.57
CPNE1-203ENST00000397442 IGSF22Q8N9C0 903 aa31.1■■■□□ 2.57
CPNE1-203ENST00000397442 ZFP91Q96JP5 570 aaPredicted RBP31.1■■■□□ 2.57
CPNE1-203ENST00000397442 PORCNQ9H237 461 aa31.1■■■□□ 2.57
CPNE1-203ENST00000397442 FAM13BQ9NYF5 915 aa31.1■■■□□ 2.57
CPNE1-203ENST00000397442 TBX3O15119 743 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ZNF202O95125 648 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 TECP42680 631 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 SYKP43405 635 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ARHGEF16Q5VV41 709 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 IFNL1Q8IU54 200 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ZIC5Q96T25 663 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 CLSTN2Q9H4D0 955 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 MROH8Q9H579 483 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ADGRA2Q96PE1 1338 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 MEIS1O00470 390 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 MSH4O15457 936 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ASTN1O14525 1302 aa31.09■■■□□ 2.57
CPNE1-203ENST00000397442 ITGB5P18084 799 aa31.08■■■□□ 2.57
CPNE1-203ENST00000397442 CDC25AP30304 524 aa31.08■■■□□ 2.57
CPNE1-203ENST00000397442 CNTN2Q02246 1040 aa31.08■■■□□ 2.57
CPNE1-203ENST00000397442 NSUN6Q8TEA1 469 aaKnown RBP31.08■■■□□ 2.57
CPNE1-203ENST00000397442 MXRA8Q9BRK3 442 aa31.08■■■□□ 2.57
CPNE1-203ENST00000397442 NUP62CLQ9H1M0 184 aa31.08■■■□□ 2.57
CPNE1-203ENST00000397442 TTC12Q9H892 705 aaPredicted RBP31.08■■■□□ 2.57
CPNE1-203ENST00000397442 A0A087X0B3 334 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 PP2D1A8MPX8 630 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 AK8Q96MA6 479 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 UIMC1Q96RL1 719 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 EFCC1Q9HA90 598 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 UBIAD1Q9Y5Z9 338 aa31.07■■■□□ 2.56
CPNE1-203ENST00000397442 KINO60870 393 aaKnown RBP31.06■■■□□ 2.56
CPNE1-203ENST00000397442 CYP4F22Q6NT55 531 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 PLA2G4DQ86XP0 818 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 SLFN12Q8IYM2 578 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 CCNA1P78396 465 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 CAMK4Q16566 473 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 FAM110CQ1W6H9 321 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 VSIG10LQ86VR7 867 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 FAM133AQ8N9E0 248 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 FAM20AQ96MK3 541 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 PCDHA12Q9UN75 941 aa31.06■■■□□ 2.56
CPNE1-203ENST00000397442 NR3C2P08235 984 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 TM4SF4P48230 202 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 SREBF2Q12772 1141 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 PDIA5Q14554 519 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 TMEM266Q2M3C6 531 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 XRRA1Q6P2D8 792 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 NIPA1Q7RTP0 329 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 DNERQ8NFT8 737 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 PANK2Q9BZ23 570 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 CREBZFQ9NS37 354 aa31.05■■■□□ 2.56
CPNE1-203ENST00000397442 POLR2DO15514 142 aaKnown RBP31.04■■■□□ 2.56
CPNE1-203ENST00000397442 ARP10275 920 aa31.04■■■□□ 2.56
CPNE1-203ENST00000397442 BCRP11274 1271 aa31.04■■■□□ 2.56
CPNE1-203ENST00000397442 MYCLP12524 364 aaPredicted RBP31.04■■■□□ 2.56
CPNE1-203ENST00000397442 SETQ01105 290 aaPredicted RBP31.04■■■□□ 2.56
CPNE1-203ENST00000397442 TIGD1Q96MW7 591 aa31.04■■■□□ 2.56
CPNE1-203ENST00000397442 CCSER1Q9C0I3 900 aa31.04■■■□□ 2.56
CPNE1-203ENST00000397442 ZNFX1Q9P2E3 1918 aaKnown RBP31.04■■■□□ 2.56
CPNE1-203ENST00000397442 DNAJC25-GNG10A0A024R161 153 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 POTEMA6NI47 508 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 RASSF10A6NK89 507 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 MARCH6O60337 910 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 APLP1P51693 650 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 SPIRE1Q08AE8 756 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 TAF1CQ15572 869 aaPredicted RBP31.03■■■□□ 2.56
CPNE1-203ENST00000397442 LONRF3Q496Y0 759 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 PDILTQ8N807 584 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 MMP19Q99542 508 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 SYCE3A1L190 88 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 SOWAHBA6NEL2 793 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 POTEB2H3BUK9 544 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 CCND2P30279 289 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 RBM43Q6ZSC3 357 aaKnown RBP31.03■■■□□ 2.56
CPNE1-203ENST00000397442 PAXIP1Q6ZW49 1069 aaPredicted RBP31.03■■■□□ 2.56
CPNE1-203ENST00000397442 MMTAG2Q9BU76 263 aaKnown RBP31.03■■■□□ 2.56
CPNE1-203ENST00000397442 WDR11Q9BZH6 1224 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 TNMDQ9H2S6 317 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 JADE2Q9NQC1 790 aa31.03■■■□□ 2.56
CPNE1-203ENST00000397442 GRM1Q13255 1194 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 KCTD2Q14681 263 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 WDR78Q5VTH9 848 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 SLC5A5Q92911 643 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 FGD4Q96M96 766 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 LRWD1Q9UFC0 647 aa31.02■■■□□ 2.56
CPNE1-203ENST00000397442 PGK2P07205 417 aa31.01■■■□□ 2.55
CPNE1-203ENST00000397442 FCER1AP12319 257 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms