RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 FRMPD4Q14CM0 1322 aa33.63■■■□□ 2.97
CHCHD4-202ENST00000396914 DUSP11O75319 330 aaKnown RBP33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 PGK1P00558 417 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 SMPD1P17405 629 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 CAPN2P17655 700 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 ARRDC4Q8NCT1 418 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 RTEL1Q9NZ71 1219 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 FRMPD3Q5JV73 1810 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 ADCY6O43306 1168 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 TRIM29Q14134 588 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 PCNX4Q63HM2 1172 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 RASGRP4Q8TDF6 673 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 SPC25Q9HBM1 224 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 PCDHA4Q9UN74 947 aa33.62■■■□□ 2.97
CHCHD4-202ENST00000396914 ADAMTS3O15072 1205 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 FARP2O94887 1054 aaPredicted RBP33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 TXNP10599 105 aaKnown RBP33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 CLK2P49760 499 aaKnown RBP33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 TTLL4Q14679 1199 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 GJC2Q5T442 439 aaPredicted RBP33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 MCTP2Q6DN12 878 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 FAM184AQ8NB25 1140 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 AP5M1Q9H0R1 490 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 GJB4Q9NTQ9 266 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 MRVI1Q9Y6F6 885 aa33.61■■■□□ 2.97
CHCHD4-202ENST00000396914 TMEM63BQ5T3F8 832 aa33.6■■■□□ 2.97
CHCHD4-202ENST00000396914 RBM47A0AV96 593 aaKnown RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 DYNC1LI2O43237 492 aaPredicted RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 C6orf222P0C671 652 aaPredicted RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 MRPS9P82933 396 aaKnown RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 HMGN5P82970 282 aaKnown RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 GNPTABQ3T906 1256 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 IFFO2Q5TF58 517 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 XRRA1Q6P2D8 792 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 RNF180Q86T96 592 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 TLK2Q86UE8 772 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 BLIDQ8IZY5 108 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 FAM177A1Q8N128 213 aaPredicted RBP33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 ANKLE1Q8NAG6 615 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 SYNRGQ9UMZ2 1314 aa33.59■■■□□ 2.97
CHCHD4-202ENST00000396914 KBTBD13C9JR72 458 aa33.58■■■□□ 2.97
CHCHD4-202ENST00000396914 STAM2O75886 525 aa33.58■■■□□ 2.97
CHCHD4-202ENST00000396914 PTGS1P23219 599 aa33.58■■■□□ 2.97
CHCHD4-202ENST00000396914 DUSP28Q4G0W2 176 aa33.58■■■□□ 2.97
CHCHD4-202ENST00000396914 GALNT17Q6IS24 598 aa33.58■■■□□ 2.97
CHCHD4-202ENST00000396914 LRRC41Q15345 812 aa33.57■■■□□ 2.96
CHCHD4-202ENST00000396914 PHF20Q9BVI0 1012 aa33.57■■■□□ 2.96
CHCHD4-202ENST00000396914 ZNF76P36508 570 aa33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 LY6KQ17RY6 165 aa33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 DIS3LQ8TF46 1054 aaKnown RBP33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 PAWRQ96IZ0 340 aaKnown RBP33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 GNEQ9Y223 722 aaKnown RBP33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 KIAA1217Q5T5P2 1943 aa33.56■■■□□ 2.96
CHCHD4-202ENST00000396914 ARIH2O95376 493 aa33.55■■■□□ 2.96
CHCHD4-202ENST00000396914 NLRX1Q86UT6 975 aa33.55■■■□□ 2.96
CHCHD4-202ENST00000396914 OR6J1Q8NGC5 347 aa33.55■■■□□ 2.96
CHCHD4-202ENST00000396914 COPS5Q92905 334 aa33.55■■■□□ 2.96
CHCHD4-202ENST00000396914 BRMS1Q9HCU9 246 aa33.55■■■□□ 2.96
CHCHD4-202ENST00000396914 DNM1LO00429 736 aa33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 NKRFO15226 690 aaKnown RBP eCLIP33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 RGS20O76081 388 aa33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 SREBF1P36956 1147 aa33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 KCNV1Q6PIU1 500 aa33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 DAGLBQ8NCG7 672 aa33.54■■■□□ 2.96
CHCHD4-202ENST00000396914 ADAMTS4O75173 837 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 GJA9P57773 515 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 ARHGAP4P98171 946 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 GNASQ5JWF2 1037 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 NECAB2Q7Z6G3 386 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 Q9Y3F1 56 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 SORBS3O60504 671 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 IRX5P78411 483 aaPredicted RBP33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 CCDC62Q6P9F0 684 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 C8orf76Q96K31 380 aa33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 INPP4AQ96PE3 977 aaPredicted RBP33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 DDX41Q9UJV9 622 aaKnown RBP33.53■■■□□ 2.96
CHCHD4-202ENST00000396914 MYADML2A6NDP7 307 aa33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 BEX3Q00994 111 aa33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 GUCY1B3Q02153 619 aa33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 UPF3AQ9H1J1 476 aaKnown RBP33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 C11orf49Q9H6J7 331 aa33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 KIF3AQ9Y496 699 aa33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.52■■■□□ 2.96
CHCHD4-202ENST00000396914 FIBPO43427 364 aa33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 GH1P01241 217 aa33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 KRT2P35908 639 aa33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 FSCN1Q16658 493 aaKnown RBP33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 KRT40Q6A162 431 aa33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 SMC3Q9UQE7 1217 aa33.51■■■□□ 2.95
CHCHD4-202ENST00000396914 CCDC194A0A1B0GVG4 234 aa33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 MNX1P50219 401 aaPredicted RBP33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 MTMR1Q13613 665 aa33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 NPY5RQ15761 445 aa33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 DHX37Q8IY37 1157 aaKnown RBP33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 FERMT2Q96AC1 680 aa33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 SENP6Q9GZR1 1112 aaPredicted RBP33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 UBIAD1Q9Y5Z9 338 aa33.5■■■□□ 2.95
CHCHD4-202ENST00000396914 TGFB3P10600 412 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 ITGB5P18084 799 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 KCNA10Q16322 511 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms