RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 WNT8AQ9H1J5 351 aa12.89□□□□□ -0.35
CNIH1-202ENST00000395573 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
CNIH1-202ENST00000395573 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
CNIH1-202ENST00000395573 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
CNIH1-202ENST00000395573 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
CNIH1-202ENST00000395573 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
CNIH1-202ENST00000395573 COPS5Q92905 334 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 SCLYQ96I15 445 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 CXXC1Q9P0U4 656 aaPredicted RBP12.88□□□□□ -0.35
CNIH1-202ENST00000395573 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 NLRC5Q86WI3 1866 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 SIP14410 1827 aa12.88□□□□□ -0.35
CNIH1-202ENST00000395573 NCOR1O75376 2440 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 A6NJR5 290 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 KPNA6O60684 536 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 CYP2C9P11712 490 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 RAB30Q15771 203 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
CNIH1-202ENST00000395573 MAF1Q9H063 256 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 IL25Q9H293 177 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
CNIH1-202ENST00000395573 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
CNIH1-202ENST00000395573 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 MUC3AQ02505 3323 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 ZBBXA8MT70 800 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 ARIH2O95376 493 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 SYTL5Q8TDW5 730 aaPredicted RBP12.86□□□□□ -0.35
CNIH1-202ENST00000395573 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
CNIH1-202ENST00000395573 TAAR1Q96RJ0 339 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 RMDN3Q96TC7 470 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 BDP1A6H8Y1 2624 aa12.86□□□□□ -0.35
CNIH1-202ENST00000395573 PRRC2BQ5JSZ5 2229 aaKnown RBP12.85□□□□□ -0.35
CNIH1-202ENST00000395573 CFBP00751 764 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
CNIH1-202ENST00000395573 PDE4AP27815 886 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 TRDNQ13061 729 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 STXBP2Q15833 593 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 CYB5R4Q7L1T6 521 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 DEFB128Q7Z7B8 93 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 PRDM12Q9H4Q4 367 aa12.85□□□□□ -0.35
CNIH1-202ENST00000395573 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
CNIH1-202ENST00000395573 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 GH1P01241 217 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 PFKMP08237 780 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 MMP3P08254 477 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
CNIH1-202ENST00000395573 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
CNIH1-202ENST00000395573 SEC23AQ15436 765 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 RUFY2Q8WXA3 655 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 AMNQ9BXJ7 453 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 PXMP2Q9NR77 195 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
CNIH1-202ENST00000395573 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
CNIH1-202ENST00000395573 ACTN1P12814 892 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 RFC2P35250 354 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 RABGGTBP53611 331 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 ARHGAP1Q07960 439 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 BFSP2Q13515 415 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 PPM1EQ8WY54 764 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 VWCEQ96DN2 955 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
CNIH1-202ENST00000395573 ERICH2A1L162 156 aa12.82□□□□□ -0.36
CNIH1-202ENST00000395573 OPLAHO14841 1288 aa12.82□□□□□ -0.36
CNIH1-202ENST00000395573 ZBTB5O15062 677 aa12.82□□□□□ -0.36
CNIH1-202ENST00000395573 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
CNIH1-202ENST00000395573 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
CNIH1-202ENST00000395573 NR3C2P08235 984 aa12.82□□□□□ -0.36
CNIH1-202ENST00000395573 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms