RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 TEX11Q8IYF3 940 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 TSEN2Q8NCE0 465 aaKnown RBP17.73■□□□□ 0.43
PDZD4-202ENST00000393758 DYDC1Q8WWB3 177 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 RIOK1Q9BRS2 568 aaKnown RBP17.73■□□□□ 0.43
PDZD4-202ENST00000393758 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 KRT13P13646 458 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 MINPP1Q9UNW1 487 aa17.73■□□□□ 0.43
PDZD4-202ENST00000393758 ARFGAP2Q8N6H7 521 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 LOC102724428A0A0B4J2F2 783 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 EPHB6O15197 1021 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 SIK1P57059 783 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
PDZD4-202ENST00000393758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDZD4-202ENST00000393758 PLAAQ9Y263 795 aa17.72■□□□□ 0.43
PDZD4-202ENST00000393758 ABCB4P21439 1286 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 KCNB1Q14721 858 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 LLGL1Q15334 1064 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 FAM26FQ5R3K3 315 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDZD4-202ENST00000393758 DDX12PQ92771 950 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 TMEM47Q9BQJ4 181 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 PPP1R2P41236 205 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 NAALADL2Q58DX5 795 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 PEX26Q7Z412 305 aa17.71■□□□□ 0.43
PDZD4-202ENST00000393758 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
PDZD4-202ENST00000393758 KRIT1O00522 736 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 ZNF76P36508 570 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 FUT2Q10981 343 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 UBE2SQ16763 222 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 ALS2CLQ60I27 953 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 PANK4Q9NVE7 773 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 E2F5Q15329 346 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 RNPC3Q96LT9 517 aaKnown RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 TDP2O95551 362 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 LDHCP07864 332 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 CREG2Q8IUH2 290 aa17.7■□□□□ 0.42
PDZD4-202ENST00000393758 MYCBPQ99417 103 aaPredicted RBP17.7■□□□□ 0.42
PDZD4-202ENST00000393758 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 NF2P35240 595 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 ACTN3Q08043 901 aaPredicted RBP17.69■□□□□ 0.42
PDZD4-202ENST00000393758 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 FAM153AQ9UHL3 310 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 LAMA4Q16363 1823 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 MYMKA6NI61 221 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 CETN3O15182 167 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 GLI1P08151 1106 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 ADCY7P51828 1080 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 ADAM9Q13443 819 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 PLS1Q14651 629 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 DDX47Q9H0S4 455 aaKnown RBP17.69■□□□□ 0.42
PDZD4-202ENST00000393758 KIAA1024Q9UPX6 916 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 FAM83BQ5T0W9 1011 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 CCSER1Q9C0I3 900 aa17.69■□□□□ 0.42
PDZD4-202ENST00000393758 FRMD3A2A2Y4 597 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 ZNF507Q8TCN5 953 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 U2AF1L4Q8WU68 220 aaKnown RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 SEMA6BQ9H3T3 888 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 NOVA2Q9UNW9 492 aaKnown RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 AARSP49588 968 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 FKBP3Q00688 224 aaKnown RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 AK8Q96MA6 479 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 TSKSQ9UJT2 592 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 PLAGL2Q9UPG8 496 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 HNRNPH1P31943 449 aaKnown RBP17.68■□□□□ 0.42
PDZD4-202ENST00000393758 SLC16A2P36021 539 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 ZFYVE27Q5T4F4 411 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 CUEDC2Q9H467 287 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 KBTBD4Q9NVX7 518 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 COL4A3BPQ9Y5P4 624 aa17.68■□□□□ 0.42
PDZD4-202ENST00000393758 ZNF263O14978 683 aa17.67■□□□□ 0.42
PDZD4-202ENST00000393758 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
PDZD4-202ENST00000393758 KLRC1P26715 233 aa17.67■□□□□ 0.42
PDZD4-202ENST00000393758 IFI16Q16666 785 aaKnown RBP17.67■□□□□ 0.42
PDZD4-202ENST00000393758 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
PDZD4-202ENST00000393758 AGPSO00116 658 aa17.67■□□□□ 0.42
PDZD4-202ENST00000393758 MYL1P05976 194 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms