RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TNNI2P48788 182 aa18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 MCUR1Q96AQ8 359 aa18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 IGF2BP3O00425 579 aaKnown RBP eCLIP18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 PFDN1O60925 122 aa18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 MMP14P50281 582 aa18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 ZNF211Q13398 564 aaPredicted RBP18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 TRPC6Q9Y210 931 aa18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
TRAF3IP1-202ENST00000391993 LUC7L3O95232 432 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 HSD17B3P37058 310 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CTCFP49711 727 aaPredicted RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 AMPD2Q01433 879 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ANKRD20A8PQ5CZ79 823 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 REXO2Q9Y3B8 237 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 KNDC1Q76NI1 1749 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SEMA3EO15041 775 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ATP6V1G2O95670 118 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 QPCTQ16769 361 aa18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TMED8Q6PL24 325 aaPredicted RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 RPGRQ92834 1020 aaKnown RBP18.58■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CCDC169A6NNP5 214 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 GNAT1P11488 350 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ZC3H18Q86VM9 953 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 VPS52Q8N1B4 723 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TRIM51Q9BSJ1 452 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 STMN4Q9H169 189 aaPredicted RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 HOMER3Q9NSC5 361 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SART1O43290 800 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 GOLGA8HP0CJ92 632 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TAOK1Q7L7X3 1001 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 BIN2Q9UBW5 565 aaPredicted RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 MAGEB6P1A0A0J9YX57 407 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PGRMC1O00264 195 aaKnown RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 GCP02774 474 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CHRM1P11229 460 aaPredicted RBP18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CALML3P27482 149 aa18.57■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TTI1O43156 1089 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 FGGP02679 453 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PMS1P54277 932 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ZNF444Q8N0Y2 327 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 MMGT1Q8N4V1 131 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 MCAMP43121 646 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PLS1Q14651 629 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 GLE1Q53GS7 698 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ATP2A2P16615 1042 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CREG2Q8IUH2 290 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 LRRC34Q8IZ02 419 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DBR1Q9UK59 544 aaKnown RBP18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DAAM1Q9Y4D1 1078 aa18.56■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DNM1LO00429 736 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ALDH3A1P30838 453 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ARHGAP44Q17R89 818 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SCYL3Q8IZE3 742 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DLGAP2Q9P1A6 1054 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 PLCG1P19174 1290 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CCNE1P24864 410 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 UAP1Q16222 522 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 MED15Q96RN5 788 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 OPHN1O60890 802 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 RWDD2BP57060 319 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TRIP13Q15645 432 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 EGFL6Q8IUX8 553 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 XPO6Q96QU8 1125 aaKnown RBP18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 FGFR1OP2Q9NVK5 253 aa18.55■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ADD2P35612 726 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CDKAL1Q5VV42 579 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DYDC2Q96IM9 177 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ZMYND12Q9H0C1 365 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 AMFRQ9UKV5 643 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TRPM8Q7Z2W7 1104 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 DTX3LQ8TDB6 740 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 ATP6V0A4Q9HBG4 840 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 WDR91A4D1P6 747 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 TCP11X1B4DZS4 312 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 NEK9Q8TD19 979 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 HOOK2Q96ED9 719 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CTTNBP2NLQ9P2B4 639 aa18.54■□□□□ 0.56
TRAF3IP1-202ENST00000391993 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 USP17L21D6R901 530 aa18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SPOPO43791 374 aa18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 SNUPNO95149 360 aaKnown RBP18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 KRT15P19012 456 aa18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 KLRC1P26715 233 aa18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
TRAF3IP1-202ENST00000391993 CEP128Q6ZU80 1094 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms