RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 QPCTQ16769 361 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 MDM1Q8TC05 714 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 CALML4Q96GE6 196 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 TBC1D7Q9P0N9 293 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 GGT7Q9UJ14 662 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
NPC1L1-202ENST00000381160 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 USP17L21D6R901 530 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 CDC25CP30307 473 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 PPP2R5BQ15173 497 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 IQCKQ8N0W5 287 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 DUSP9Q99956 384 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 DDX47Q9H0S4 455 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 TMEM60Q9H2L4 133 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 PLAGL2Q9UPG8 496 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 TRAF5O00463 557 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 SCTRP47872 440 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 HLFQ16534 295 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 CCDC63Q8NA47 563 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 TSG101Q99816 390 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 HSD17B3P37058 310 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 ZCRB1Q8TBF4 217 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 FBXL5Q9UKA1 691 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 ATP8A1Q9Y2Q0 1164 aa12.28□□□□□ -0.44
NPC1L1-202ENST00000381160 DNM1LO00429 736 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 FGFR1OPO95684 399 aaKnown RBP12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 TXKP42681 527 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 KLHL30Q0D2K2 578 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 DNAAF5Q86Y56 855 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 LSM14BQ9BX40 385 aaKnown RBP12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 CD2APQ9Y5K6 639 aa12.27□□□□□ -0.44
NPC1L1-202ENST00000381160 KIF5BP33176 963 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 DHX9Q08211 1270 aaKnown RBP12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 TAF1DQ9H5J8 278 aaPredicted RBP12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 TMOD3Q9NYL9 352 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 JAG2Q9Y219 1238 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 KRIT1O00522 736 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 ADAMTS3O15072 1205 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 TRAPPC10P48553 1259 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 PPP2R2AP63151 447 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 ANKRD20A8PQ5CZ79 823 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 SPDL1Q96EA4 605 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 SPAG5Q96R06 1193 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 SAMD15Q9P1V8 674 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.45
NPC1L1-202ENST00000381160 RHOBTB3O94955 611 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 STARD3NLO95772 234 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 KLRC1P26715 233 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 CCDC197Q8NCU1 140 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 OSBPL7Q9BZF2 842 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 SPRED3Q2MJR0 410 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 PPP4R3AQ6IN85 833 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 RASSF9O75901 435 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 MAN2A1Q16706 1144 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 ARL6IP4Q66PJ3 421 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 RUBCNQ92622 972 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 PURBQ96QR8 312 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 DAPK3O43293 454 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 PRLRP16471 622 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 ATF3P18847 181 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 SV2BQ7L1I2 683 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 MGARPQ8TDB4 240 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 TTYH3Q9C0H2 523 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 SEPT11Q9NVA2 429 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
NPC1L1-202ENST00000381160 KCNB1Q14721 858 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 PLCB4Q15147 1175 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 ACCSLQ4AC99 568 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 NAALADL2Q58DX5 795 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 STAMBPL1Q96FJ0 436 aa12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 ELAC2Q9BQ52 826 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-202ENST00000381160 NOD2Q9HC29 1040 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms