RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
CHD3-203ENST00000380358 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
CHD3-203ENST00000380358 NLRP12P59046 1061 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 MORC3Q14149 939 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ARHGEF6Q15052 776 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 TMEM87BQ96K49 555 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 NUDCD1Q96RS6 583 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 GOLGA8IPA6NC78 632 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 GOLGA8JA6NMD2 632 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
CHD3-203ENST00000380358 VMP1Q96GC9 406 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
CHD3-203ENST00000380358 Q9H521 79 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ZC4H2Q9NQZ6 224 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 EYA2O00167 538 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 PPARAQ07869 468 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 KRT40Q6A162 431 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 DDIT3P35638 169 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 EHHADHQ08426 723 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ADAM9Q13443 819 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 IMPG1Q17R60 797 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 RFWD2Q8NHY2 731 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 MAML1Q92585 1016 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ATP6V0A1Q93050 837 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
CHD3-203ENST00000380358 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 CUTAO60888 179 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
CHD3-203ENST00000380358 RECQLP46063 649 aaPredicted RBP13.47□□□□□ -0.25
CHD3-203ENST00000380358 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 KMT5AQ9NQR1 393 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 RETREG2Q8NC44 543 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 PBXIP1Q96AQ6 731 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 CLIC6Q96NY7 704 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
CHD3-203ENST00000380358 E2F5Q15329 346 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 IGF1RP08069 1367 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 KRT1P04264 644 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 LRCH2Q5VUJ6 765 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 APPBP2Q92624 585 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 DOLKQ9UPQ8 538 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 TMEM247A6NEH6 219 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 ENC1O14682 589 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 MAPK4P31152 587 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 DRP2Q13474 957 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 TFDP1Q14186 410 aa13.47□□□□□ -0.25
CHD3-203ENST00000380358 E2F6O75461 281 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 SOX11P35716 441 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 PPP1R2P41236 205 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.25
CHD3-203ENST00000380358 ARMCX3Q9UH62 379 aaPredicted RBP13.46□□□□□ -0.25
CHD3-203ENST00000380358 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
CHD3-203ENST00000380358 MAGEB10Q96LZ2 347 aaPredicted RBP13.46□□□□□ -0.25
CHD3-203ENST00000380358 CASS4Q9NQ75 786 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 GDAQ9Y2T3 454 aa13.46□□□□□ -0.25
CHD3-203ENST00000380358 EIF4E1BA6NMX2 242 aaKnown RBP13.46□□□□□ -0.26
CHD3-203ENST00000380358 DDHD2O94830 711 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 ANKRD20A4Q4UJ75 823 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 SLFN13Q68D06 897 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 TRIM4Q9C037 500 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 OGFRQ9NZT2 677 aa13.46□□□□□ -0.26
CHD3-203ENST00000380358 UPP2O95045 317 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 PTK2Q05397 1052 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 LPIN2Q92539 896 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 TSC1Q92574 1164 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 SAR1BQ9Y6B6 198 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 KDM3AQ9Y4C1 1321 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 ARL4AP40617 200 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 GUCY2DQ02846 1103 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 CEP170P1Q96L14 293 aa13.45□□□□□ -0.26
CHD3-203ENST00000380358 GPR101Q96P66 508 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms