RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 FAM133AQ8N9E0 248 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 MYCBPAPQ8TBZ2 947 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 RASSF10A6NK89 507 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 SCP2P22307 547 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 EXOC3L4Q17RC7 722 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 SLC30A9Q6PML9 568 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 CYB5R4Q7L1T6 521 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 ANKRD35Q8N283 1001 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 SDR42E1Q8WUS8 393 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 ARL8AQ96BM9 186 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 TYW1Q9NV66 732 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 DENND2AQ9ULE3 1009 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 PCDHB13Q9Y5F0 798 aa9.89□□□□□ -0.83
CRNKL1-201ENST00000377327 ABCA6Q8N139 1617 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 SART1O43290 800 aaKnown RBP9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 BCRP11274 1271 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 ADCY8P40145 1251 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 DR1Q01658 176 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 TFAP4Q01664 338 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 KDM7AQ6ZMT4 941 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 NEK8Q86SG6 692 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 CFAP61Q8NHU2 1237 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 BICD1Q96G01 975 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 VCPKMTQ9H867 229 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 IRAK4Q9NWZ3 460 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PRR36Q9H6K5 1346 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 LRRC53A6NM62 1247 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 AARSP49588 968 aaKnown RBP eCLIP9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 ARHGAP44Q17R89 818 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 FBXL5Q9UKA1 691 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 HPSEQ9Y251 543 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 TBX22Q9Y458 520 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 ZNF609O15014 1411 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PHF20L1A8MW92 1017 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 CHGBP05060 677 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PDHA1P08559 390 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PHKA1P46020 1223 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 CARSP49589 748 aaKnown RBP9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 VPS41P49754 854 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 RNASELQ05823 741 aaKnown RBP9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PPP1R21Q6ZMI0 780 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 TBC1D10CQ8IV04 446 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 SPZ1Q9BXG8 430 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 VPS37BQ9H9H4 285 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 PANK4Q9NVE7 773 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 USH1CQ9Y6N9 552 aa9.88□□□□□ -0.83
CRNKL1-201ENST00000377327 GFPT1Q06210 699 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 ALKBH5Q6P6C2 394 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 LRIG3Q6UXM1 1119 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 KIFAP3Q92845 792 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 ATP5HO75947 161 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 HSPA6P17066 643 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 ERVK-24P63145 666 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 STRN3Q13033 797 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 DBN1Q16643 649 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 RASGRP4Q8TDF6 673 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 NSMCE1Q8WV22 266 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 LARP4BQ92615 738 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 NOD2Q9HC29 1040 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 METTL14Q9HCE5 456 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 DNM3Q9UQ16 869 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 USP6P35125 1406 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 FAM170AA1A519 330 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 H0Y3Z8 333 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 PDE8BO95263 885 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 PAPD7Q5XG87 772 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 SGMS1Q86VZ5 419 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 DDX23Q9BUQ8 820 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 ECT2Q9H8V3 914 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 EHMT1Q9H9B1 1298 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 RBM12Q9NTZ6 932 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 STOML1Q9UBI4 398 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 PTPN22Q9Y2R2 807 aa9.87□□□□□ -0.83
CRNKL1-201ENST00000377327 FGGP02679 453 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 PLCG1P19174 1290 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 RBM5P52756 815 aaKnown RBP eCLIP9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 SLC8A3P57103 927 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 IRX4P78413 519 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 LRRC63Q05C16 580 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 ADCY1Q08828 1119 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 TBX2Q13207 712 aaPredicted RBP9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 LRRC41Q15345 812 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 LY9Q9HBG7 655 aa9.86□□□□□ -0.83
CRNKL1-201ENST00000377327 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms