RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 CCHCR1Q8TD31 782 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 NR1H4Q96RI1 486 aaPredicted RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 TUT1Q9H6E5 874 aaKnown RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 TRAF3IP3Q9Y228 551 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 PCDHGC5Q9Y5F6 944 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 PCDHGB3Q9Y5G1 929 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 CCDC7Q96M83 1385 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 KRBA1A5PL33 1030 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 LRRC10BA6NIK2 292 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 CYP17A1P05093 508 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 FDX1P10109 184 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 ZNF3P17036 446 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 VARSP26640 1264 aaKnown RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 RFC5P40937 340 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 KRT83P78385 493 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 CCDC38Q502W7 563 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 GKAP1Q5VSY0 366 aaPredicted RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 ZER1Q7Z7L7 766 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 LURAP1LQ8IV03 231 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 C7orf61Q8IZ16 206 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 CCAR2Q8N163 923 aaKnown RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 CNNM3Q8NE01 707 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 ARHGAP45Q92619 1136 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 HOOK2Q96ED9 719 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 FAM163AQ96GL9 167 aaPredicted RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 TMX3Q96JJ7 454 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 TSG101Q99816 390 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 HERPUD2Q9BSE4 406 aa4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 PNMA8BQ9ULN7 279 aaPredicted RBP4.35□□□□□ -1.71
TMEM38B-201ENST00000374688 TTC34A8MYJ7 566 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ACSL4O60488 711 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ZBED4O75132 1171 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 NPPAP01160 153 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 HNF1BP35680 557 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ARHGAP25P42331 645 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CCT5P48643 541 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 PMS2P54278 862 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 BASP1P80723 227 aaKnown RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 LMNB2Q03252 620 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CACNB2Q08289 660 aaPredicted RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 TMEM259Q4ZIN3 620 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 MCF2L2Q86YR7 1114 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CCDC83Q8IWF9 413 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SIX5Q8N196 739 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 UBR7Q8N806 425 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ZNF594Q96JF6 807 aaPredicted RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CNDP1Q96KN2 507 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 TTC25Q96NG3 672 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 TSGA13Q96PP4 275 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 UBXN6Q9BZV1 441 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 NEUROD4Q9HD90 331 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CYLDQ9NQC7 956 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ABCF3Q9NUQ8 709 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 NDFIP2Q9NV92 336 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SAGE1Q9NXZ1 904 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CEP72Q9P209 647 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ORC3Q9UBD5 711 aaPredicted RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 MTRRQ9UBK8 725 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SYNJ2BP-COX16A0A087WUM0 186 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 MYO1FO00160 1098 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 AP3B1O00203 1094 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ZW10O43264 779 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 PRPF3O43395 683 aaKnown RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 EXTL3O43909 919 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 F2P00734 622 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 KRT14P02533 472 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 STAT3P40763 770 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 FANCCQ00597 558 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 RUNX1T1Q06455 604 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 NBPF14Q5TI25 921 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 MZT2BQ6NZ67 158 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SPATA2LQ8IUW3 424 aaPredicted RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 SLC16A10Q8TF71 515 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 TRMT2BQ96GJ1 504 aaKnown RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 CATSPER2Q96P56 530 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 GBP3Q9H0R5 595 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 IL1RAPL1Q9NZN1 696 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ZC3H7BQ9UGR2 993 aaKnown RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 MTF2Q9Y483 593 aaPredicted RBP4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 ATP6V1DQ9Y5K8 247 aa4.34□□□□□ -1.71
TMEM38B-201ENST00000374688 PI4K2BG5E9Z4 385 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 TBC1D8O95759 1140 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 TMEM11P17152 192 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 ANXA13P27216 316 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 CDC25CP30307 473 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 RAD52P43351 418 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 CTCFP49711 727 aaPredicted RBP4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 PFKPQ01813 784 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 APBA1Q02410 837 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 MRPL58Q14197 206 aaKnown RBP4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 COG2Q14746 738 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 STK38Q15208 465 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 DALRD3Q5D0E6 543 aaKnown RBP4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 ADALQ6DHV7 355 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 CAPN12Q6ZSI9 719 aa4.34□□□□□ -1.72
TMEM38B-201ENST00000374688 VPS37DQ86XT2 251 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms