RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 BAIAP3O94812 1187 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 COL9A1P20849 921 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 STXBP2Q15833 593 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 ASPRV1Q53RT3 343 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 KRT40Q6A162 431 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 SPRED2Q7Z698 418 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 ARNTL2Q8WYA1 636 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
CXCL12-202ENST00000374426 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-202ENST00000374426 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
CXCL12-202ENST00000374426 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
CXCL12-202ENST00000374426 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 EIF2AK2P19525 551 aaKnown RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 RBL2Q08999 1139 aa16.1■□□□□ 0.17
CXCL12-202ENST00000374426 SKIV2LQ15477 1246 aaKnown RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
CXCL12-202ENST00000374426 FBXO11Q86XK2 927 aa16.1■□□□□ 0.17
CXCL12-202ENST00000374426 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
CXCL12-202ENST00000374426 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
CXCL12-202ENST00000374426 TCF20Q9UGU0 1960 aaKnown RBP16.09■□□□□ 0.17
CXCL12-202ENST00000374426 OPLAHO14841 1288 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 DHX16O60231 1041 aaKnown RBP16.09■□□□□ 0.17
CXCL12-202ENST00000374426 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
CXCL12-202ENST00000374426 SELPP16109 830 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 KCNQ1P51787 676 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
CXCL12-202ENST00000374426 NUCB1Q02818 461 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 DGKDQ16760 1214 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 LRRC8DQ7L1W4 858 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 TMCO2Q7Z6W1 182 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-202ENST00000374426 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 PXMP2Q9NR77 195 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 DIAPH3Q9NSV4 1193 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 GTF2IRD1Q9UHL9 959 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 KIAA1217Q5T5P2 1943 aa16.09■□□□□ 0.17
CXCL12-202ENST00000374426 PTPRSQ13332 1948 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 LCHNA4D1U4 455 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 TLL1O43897 1013 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 LPXNO60711 386 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 NBNO60934 754 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
CXCL12-202ENST00000374426 CFBP00751 764 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 IGHDP01880 384 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 CXCL10P02778 98 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 NR3C2P08235 984 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 CKBP12277 381 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 KCNJ6P48051 423 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 AAMPQ13685 434 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
CXCL12-202ENST00000374426 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 TCTN1Q2MV58 587 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-202ENST00000374426 HDAC6Q9UBN7 1215 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 RAPGEFL1Q9UHV5 662 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 MRVI1Q9Y6F6 885 aa16.08■□□□□ 0.16
CXCL12-202ENST00000374426 HAS3O00219 553 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 PPP1R11O60927 126 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-202ENST00000374426 RGS20O76081 388 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 F2P00734 622 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 ZNF286BP0CG31 522 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 PSEN2P49810 448 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 HSD17B4P51659 736 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 DEFB103AP81534 67 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 GHRHRQ02643 423 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 GRB10Q13322 594 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 MYH6P13533 1939 aa16.07■□□□□ 0.16
CXCL12-202ENST00000374426 HIP1O00291 1037 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
CXCL12-202ENST00000374426 HOXD8P13378 290 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-202ENST00000374426 MFSD10Q14728 455 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 TRIM71Q2Q1W2 868 aaKnown RBP16.06■□□□□ 0.16
CXCL12-202ENST00000374426 CNKSR3Q6P9H4 555 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 WNT8BQ93098 351 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 UBAC1Q9BSL1 405 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 KATNAL1Q9BW62 490 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 KRT23Q9C075 422 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 IL25Q9H293 177 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
CXCL12-202ENST00000374426 COG5Q9UP83 839 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms