RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FAM86B2P0C5J1 330 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 SKILP12757 684 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 SFPQP23246 707 aaKnown RBP eCLIP27.99■■■□□ 2.07
CTSA-203ENST00000372459 FAM20AQ96MK3 541 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 SLF1Q9BQI6 1058 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 EHMT1Q9H9B1 1298 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 A0A1B0GTH6 734 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 PSMA7O14818 248 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 ZNF76P36508 570 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 CCT6AP40227 531 aaKnown RBP27.99■■■□□ 2.07
CTSA-203ENST00000372459 CCZ1BP86790 482 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 CCZ1P86791 482 aaPredicted RBP27.99■■■□□ 2.07
CTSA-203ENST00000372459 TRPM4Q8TD43 1214 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 LENG9Q96B70 501 aa27.99■■■□□ 2.07
CTSA-203ENST00000372459 ICAM1P05362 532 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 PPP1R2P41236 205 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 ARMCX5Q6P1M9 558 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 CNNM4Q6P4Q7 775 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 MAP7D2Q96T17 732 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 ZNF112Q9UJU3 913 aa27.98■■■□□ 2.07
CTSA-203ENST00000372459 USP14P54578 494 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 NR1I3Q14994 352 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 DNTTIP2Q5QJE6 756 aaKnown RBP27.97■■■□□ 2.07
CTSA-203ENST00000372459 SCYL3Q8IZE3 742 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 UBE2Q2Q8WVN8 375 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 TBC1D5Q92609 795 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 DOCK1Q14185 1865 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 PVALEFA0A1B0GWK0 134 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 MYMKA6NI61 221 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 NRDCO43847 1150 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 SPAG1Q07617 926 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 ECM1Q16610 540 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 HAUS3Q68CZ6 603 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 APTXQ7Z2E3 356 aaKnown RBP27.97■■■□□ 2.07
CTSA-203ENST00000372459 CCPG1Q9ULG6 757 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 STK24Q9Y6E0 443 aa27.97■■■□□ 2.07
CTSA-203ENST00000372459 FILIP1LQ4L180 1135 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 UNC13DQ70J99 1090 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 KCNK18Q7Z418 384 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 MYRIPQ8NFW9 859 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 DHTKD1Q96HY7 919 aaPredicted RBP27.96■■■□□ 2.07
CTSA-203ENST00000372459 UIMC1Q96RL1 719 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 PPP2R3BQ9Y5P8 575 aa27.96■■■□□ 2.07
CTSA-203ENST00000372459 COBLO75128 1261 aa27.95■■■□□ 2.07
CTSA-203ENST00000372459 MTMR2Q13614 643 aa27.95■■■□□ 2.07
CTSA-203ENST00000372459 SPECC1LQ69YQ0 1117 aa27.95■■■□□ 2.07
CTSA-203ENST00000372459 AS3MTQ9HBK9 375 aa27.95■■■□□ 2.07
CTSA-203ENST00000372459 GGA3Q9NZ52 723 aa27.95■■■□□ 2.07
CTSA-203ENST00000372459 COBLL1Q53SF7 1204 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 ANKRD20A12PQ8NF67 263 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 ERMNQ8TAM6 284 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 WRNIP1Q96S55 665 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 WDR18Q9BV38 432 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 TANGO6Q9C0B7 1094 aa27.95■■■□□ 2.06
CTSA-203ENST00000372459 ZNF536O15090 1300 aa27.94■■■□□ 2.06
CTSA-203ENST00000372459 MSH4O15457 936 aa27.94■■■□□ 2.06
CTSA-203ENST00000372459 SPIRE1Q08AE8 756 aa27.94■■■□□ 2.06
CTSA-203ENST00000372459 AGBL1Q96MI9 1066 aa27.94■■■□□ 2.06
CTSA-203ENST00000372459 PICK1Q9NRD5 415 aa27.94■■■□□ 2.06
CTSA-203ENST00000372459 ADD3Q9UEY8 706 aaKnown RBP27.94■■■□□ 2.06
CTSA-203ENST00000372459 LIMA1Q9UHB6 759 aaKnown RBP27.94■■■□□ 2.06
CTSA-203ENST00000372459 VCAM1P19320 739 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 HOXA7P31268 230 aaPredicted RBP27.93■■■□□ 2.06
CTSA-203ENST00000372459 STK4Q13043 487 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 FHDC1Q9C0D6 1143 aaPredicted RBP27.93■■■□□ 2.06
CTSA-203ENST00000372459 EMILIN3Q9NT22 766 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 KIAA1024Q9UPX6 916 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 STAT3P40763 770 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 EPS15P42566 896 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 DYMQ7RTS9 669 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 DDX12PQ92771 950 aa27.93■■■□□ 2.06
CTSA-203ENST00000372459 IGLV3-22A0A075B6J6 115 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 FLOT1O75955 427 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 SPP2Q13103 211 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 PRAMEF18Q5VWM3 479 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 NCAPH2Q6IBW4 605 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 CYP2W1Q8TAV3 490 aa27.92■■■□□ 2.06
CTSA-203ENST00000372459 POTEB3A0JP26 581 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 BICDL2A1A5D9 508 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 TRIM49BA6NDI0 452 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 LRRC10BA6NIK2 292 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 POTECB2RU33 542 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 FCER1AP12319 257 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 TBX2Q13207 712 aaPredicted RBP27.91■■■□□ 2.06
CTSA-203ENST00000372459 DGKZQ13574 1117 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 TCP11X2Q5H9J9 407 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 POTEBQ6S5H4 581 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 MTERF4Q7Z6M4 381 aaKnown RBP27.91■■■□□ 2.06
CTSA-203ENST00000372459 ZKSCAN4Q969J2 545 aaPredicted RBP27.91■■■□□ 2.06
CTSA-203ENST00000372459 SLC38A10Q9HBR0 1119 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 PPP1R9AQ9ULJ8 1098 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 KCNJ18B7U540 433 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 PTPRAP18433 802 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 CCNE1P24864 410 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 HSD17B4P51659 736 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 BACE1P56817 501 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 KCNJ12Q14500 433 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 KRT31Q15323 416 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 PTPN21Q16825 1174 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 GLIPR1L2Q4G1C9 344 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms