RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ZFYVE27Q5T4F4 411 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 WDR78Q5VTH9 848 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 FBXW10Q5XX13 1052 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 RINLQ6ZS11 566 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 TSHZ1Q6ZSZ6 1077 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 ABI1Q8IZP0 508 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 MKL1Q969V6 931 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 EVI5LQ96CN4 794 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 SLC9A7Q96T83 725 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 DUSP15Q9H1R2 295 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 SIRPGQ9P1W8 387 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 KLHL42Q9P2K6 505 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 BCL9O00512 1426 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 H3BS24 57 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 IMPDH2P12268 514 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 CALRP27797 417 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 POLD1P28340 1107 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 FSTL1Q12841 308 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 INTS3Q68E01 1043 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 TP53INP2Q8IXH6 220 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 TCP11L2Q8N4U5 519 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 PIWIL2Q8TC59 973 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 ASB11Q8WXH4 323 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 CRBNQ96SW2 442 aa6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.4□□□□□ -1.38
ECHDC1-204ENST00000368292 PNPLA7Q6ZV29 1317 aa6.4□□□□□ -1.39
ECHDC1-204ENST00000368292 NHSQ6T4R5 1651 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 KNDC1Q76NI1 1749 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 WASH4PA8MWX3 477 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 CLGNO14967 610 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 SRFP11831 508 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 FUT4P22083 530 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 CCNFP41002 786 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 IGBP1P78318 339 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 NFE2L2Q16236 605 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 TNNI3KQ59H18 835 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 RUFY4Q6ZNE9 571 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 NLGN1Q8N2Q7 840 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 TAB3Q8N5C8 712 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 ATP13A1Q9HD20 1204 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 ADGRE2Q9UHX3 823 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 SBNO2Q9Y2G9 1366 aa6.39□□□□□ -1.39
ECHDC1-204ENST00000368292 CCDC194A0A1B0GVG4 234 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 NBPF12Q5TAG4 269 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 THAP5Q7Z6K1 395 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 ZNF622Q969S3 477 aaKnown RBP eCLIP6.38□□□□□ -1.391e-7■□□□□ 9.8
ECHDC1-204ENST00000368292 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 TM9SF2Q99805 663 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 GPR62Q9BZJ7 368 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 PNMA2Q9UL42 364 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 RPS6KL1Q9Y6S9 549 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 ANKRD30AQ9BXX3 1397 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 QRICH2Q9H0J4 1663 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 BTAF1O14981 1849 aa6.38□□□□□ -1.39
ECHDC1-204ENST00000368292 COL5A2P05997 1499 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ANKRD50Q9ULJ7 1429 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ANP32CO43423 234 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 PARNO95453 639 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 CASP7P55210 303 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 RASA3Q14644 834 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ZYXQ15942 572 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 GAB4Q2WGN9 574 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 HSP90AB2PQ58FF8 381 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 CBLL1Q75N03 491 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 AGBL5Q8NDL9 886 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 PMM1Q92871 262 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 GPATCH3Q96I76 525 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 SLC6A18Q96N87 628 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 SRPK1Q96SB4 655 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 MAF1Q9H063 256 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-204ENST00000368292 PKD1L3Q7Z443 1732 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 C10orf71Q711Q0 1435 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 SHISA3A0PJX4 238 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 EXOC5O00471 708 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 PAX3P23760 479 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 GUCY2CP25092 1073 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms