RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 SLC26A6Q9BXS9 759 aa22.88■■□□□ 1.25
H3F3A-204ENST00000366816 BARHL2Q9NY43 387 aa22.88■■□□□ 1.25
H3F3A-204ENST00000366816 TPCN1Q9ULQ1 816 aa22.88■■□□□ 1.25
H3F3A-204ENST00000366816 ZMYND8Q9ULU4 1186 aaPredicted RBP22.88■■□□□ 1.25
H3F3A-204ENST00000366816 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
H3F3A-204ENST00000366816 MOXD2PA6NHM9 499 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 PRPF3O43395 683 aaKnown RBP22.87■■□□□ 1.25
H3F3A-204ENST00000366816 DTNBO60941 627 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 TRIM60Q495X7 471 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 CXCL17Q6UXB2 119 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 VTI1AQ96AJ9 217 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 ALDH8A1Q9H2A2 487 aaPredicted RBP22.87■■□□□ 1.25
H3F3A-204ENST00000366816 STARD7Q9NQZ5 370 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 RTEL1Q9NZ71 1219 aa22.87■■□□□ 1.25
H3F3A-204ENST00000366816 SMCO2A6NFE2 343 aa22.86■■□□□ 1.25
H3F3A-204ENST00000366816 SCG2P13521 617 aa22.86■■□□□ 1.25
H3F3A-204ENST00000366816 IFNAR1P17181 557 aa22.86■■□□□ 1.25
H3F3A-204ENST00000366816 NEK4P51957 841 aa22.86■■□□□ 1.25
H3F3A-204ENST00000366816 MRPS9P82933 396 aaKnown RBP22.86■■□□□ 1.25
H3F3A-204ENST00000366816 RIC8AQ9NPQ8 531 aa22.86■■□□□ 1.25
H3F3A-204ENST00000366816 DDX41Q9UJV9 622 aaKnown RBP22.86■■□□□ 1.25
H3F3A-204ENST00000366816 FRMPD4Q14CM0 1322 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 SORBS3O60504 671 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 AKAP17AQ02040 695 aaKnown RBP22.85■■□□□ 1.25
H3F3A-204ENST00000366816 GLT1D1Q96MS3 346 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 MRVI1Q9Y6F6 885 aa22.85■■□□□ 1.25
H3F3A-204ENST00000366816 CPLX1O14810 134 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 ADAMTS3O15072 1205 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 NKRFO15226 690 aaKnown RBP eCLIP22.84■■□□□ 1.25
H3F3A-204ENST00000366816 ADCY7P51828 1080 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 SCRN1Q12765 414 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 SNX17Q15036 470 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 PPP1R18Q6NYC8 613 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 PGBD1Q96JS3 809 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 RNF26Q9BY78 433 aaPredicted RBP22.84■■□□□ 1.25
H3F3A-204ENST00000366816 TMEM260Q9NX78 707 aa22.84■■□□□ 1.25
H3F3A-204ENST00000366816 SPDYE3A6NKU9 549 aa22.83■■□□□ 1.25
H3F3A-204ENST00000366816 hCG_1984214I3L0E3 225 aa22.83■■□□□ 1.25
H3F3A-204ENST00000366816 PSMC6P62333 389 aa22.83■■□□□ 1.25
H3F3A-204ENST00000366816 SP2Q02086 613 aa22.83■■□□□ 1.25
H3F3A-204ENST00000366816 TLE2Q04725 743 aa22.83■■□□□ 1.25
H3F3A-204ENST00000366816 ZNF713Q8N859 430 aaPredicted RBP22.83■■□□□ 1.25
H3F3A-204ENST00000366816 SLKQ9H2G2 1235 aaPredicted RBP22.83■■□□□ 1.25
H3F3A-204ENST00000366816 CEP290O15078 2479 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 ZEB2O60315 1214 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 GH1P01241 217 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 MYL3P08590 195 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 CPT1AP50416 773 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 ARHGAP1Q07960 439 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 SSRP1Q08945 709 aaKnown RBP22.82■■□□□ 1.24
H3F3A-204ENST00000366816 ANKRD1Q15327 319 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 C1orf53Q5VUE5 145 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 PCNX4Q63HM2 1172 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 NECAB1Q8N987 351 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 AFG1LQ8WV93 481 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 KIF2CQ99661 725 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 C22orf23Q9BZE7 217 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 BCAS3Q9H6U6 928 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 RBM27Q9P2N5 1060 aaKnown RBP22.82■■□□□ 1.24
H3F3A-204ENST00000366816 KIAA1217Q5T5P2 1943 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 ELP1O95163 1332 aa22.82■■□□□ 1.24
H3F3A-204ENST00000366816 A6NJR5 290 aa22.81■■□□□ 1.24
H3F3A-204ENST00000366816 PFKFB2O60825 505 aa22.81■■□□□ 1.24
H3F3A-204ENST00000366816 PQBP1O60828 265 aaKnown RBP22.81■■□□□ 1.24
H3F3A-204ENST00000366816 LARGE1O95461 756 aa22.81■■□□□ 1.24
H3F3A-204ENST00000366816 VPS54Q9P1Q0 977 aa22.81■■□□□ 1.24
H3F3A-204ENST00000366816 PURAQ00577 322 aaKnown RBP22.8■■□□□ 1.24
H3F3A-204ENST00000366816 SEMA3FQ13275 785 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 ME3Q16798 604 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 JAKMIP3Q5VZ66 844 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 CHRDL2Q6WN34 429 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 SH3RF1Q7Z6J0 888 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 DHX37Q8IY37 1157 aaKnown RBP22.8■■□□□ 1.24
H3F3A-204ENST00000366816 TRIM22Q8IYM9 498 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 PPP1R13LQ8WUF5 828 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 INPP4AQ96PE3 977 aaPredicted RBP22.8■■□□□ 1.24
H3F3A-204ENST00000366816 PRDM5Q9NQX1 630 aaPredicted RBP22.8■■□□□ 1.24
H3F3A-204ENST00000366816 GRIN2DO15399 1336 aa22.8■■□□□ 1.24
H3F3A-204ENST00000366816 A0A0U1RQG5 324 aaPredicted RBP22.79■■□□□ 1.24
H3F3A-204ENST00000366816 SPATA31C2B4DYI2 1134 aa22.79■■□□□ 1.24
H3F3A-204ENST00000366816 CLK2P49760 499 aaKnown RBP22.79■■□□□ 1.24
H3F3A-204ENST00000366816 CDK7P50613 346 aa22.79■■□□□ 1.24
H3F3A-204ENST00000366816 CPLX2Q6PUV4 134 aaKnown RBP22.79■■□□□ 1.24
H3F3A-204ENST00000366816 AIFM3Q96NN9 605 aa22.79■■□□□ 1.24
H3F3A-204ENST00000366816 ZMYND12Q9H0C1 365 aa22.79■■□□□ 1.24
H3F3A-204ENST00000366816 COLQQ9Y215 455 aaPredicted RBP22.79■■□□□ 1.24
H3F3A-204ENST00000366816 ARVCFO00192 962 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 STAM2O75886 525 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 CABYRO75952 493 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 GGPS1O95749 300 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 UBA1P22314 1058 aaKnown RBP22.78■■□□□ 1.24
H3F3A-204ENST00000366816 ITGA7Q13683 1181 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 GNPTABQ3T906 1256 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 BRDTQ58F21 947 aaPredicted RBP22.78■■□□□ 1.24
H3F3A-204ENST00000366816 CELF3Q5SZQ8 465 aaKnown RBP22.78■■□□□ 1.24
H3F3A-204ENST00000366816 MYSM1Q5VVJ2 828 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 XRRA1Q6P2D8 792 aa22.78■■□□□ 1.24
H3F3A-204ENST00000366816 KCNV1Q6PIU1 500 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 1220.4 ms