RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 MTMR3Q13615 1198 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 PPM1KQ8N3J5 372 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 MRRFQ96E11 262 aaKnown RBP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 WDR24Q96S15 920 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 RAB17Q9H0T7 212 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 MROH7-TTC4A0A0A0MT08 1334 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 LIN9Q5TKA1 542 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
SCAF1-201ENST00000360565 FAM184BQ9ULE4 1060 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 ADAMTS1Q9UHI8 967 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 PNMA6FA0A0J9YX94 578 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 TTC26A0AVF1 554 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 CLRN2A0PK11 232 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 TNNI1P19237 187 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 CASP8Q14790 479 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 NSUN4Q96CB9 384 aaKnown RBP17.92■□□□□ 0.46
SCAF1-201ENST00000360565 SPATA31D1Q6ZQQ2 1576 aa17.92■□□□□ 0.46
SCAF1-201ENST00000360565 ORC4O43929 436 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 TRIM37O94972 964 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 HGSO14964 777 aaPredicted RBP17.91■□□□□ 0.46
SCAF1-201ENST00000360565 LRRC63Q05C16 580 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 XKR9Q5GH70 373 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 IWS1Q96ST2 819 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 FERMT1Q9BQL6 677 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 CAPS2Q9BXY5 557 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 EPB41L5Q9HCM4 733 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 UBE2Q2LH0YL09 131 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 RNF40O75150 1001 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 HEXIM1O94992 359 aaKnown RBP17.91■□□□□ 0.46
SCAF1-201ENST00000360565 NT5C2P49902 561 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 MRPS25P82663 173 aaKnown RBP17.91■□□□□ 0.46
SCAF1-201ENST00000360565 TERF2Q15554 542 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 FAM102BQ5T8I3 360 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 GOLGA5Q8TBA6 731 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 PCDHA13Q9Y5I0 950 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 AP5Z1O43299 807 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 CACNB3P54284 484 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 PRKG1Q13976 671 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 TEKT3Q9BXF9 490 aa17.91■□□□□ 0.46
SCAF1-201ENST00000360565 SRGAP2O75044 1071 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 AFPP02771 609 aaKnown RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 GRIN1Q05586 938 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 BZW2Q9Y6E2 419 aaKnown RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 BMP3P12645 472 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 GYS2P54840 703 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 GRM4Q14833 912 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 TTC19Q6DKK2 380 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 UNC13DQ70J99 1090 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 FAM186BQ8IYM0 893 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 MSANTD4Q8NCY6 345 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 PSMD2Q13200 908 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 TRPC3Q13507 836 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 DENND2CQ68D51 928 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 DCUN1D2Q6PH85 259 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
SCAF1-201ENST00000360565 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.9■□□□□ 0.46
SCAF1-201ENST00000360565 GOLGA8KD6RF30 607 aa17.89■□□□□ 0.46
SCAF1-201ENST00000360565 TMC4Q7Z404 712 aa17.89■□□□□ 0.46
SCAF1-201ENST00000360565 PPM1EQ8WY54 764 aa17.89■□□□□ 0.46
SCAF1-201ENST00000360565 AGTPBP1Q9UPW5 1226 aa17.89■□□□□ 0.46
SCAF1-201ENST00000360565 UHMK1Q8TAS1 419 aaKnown RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 ARHGEF1Q92888 912 aaKnown RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 TMEM260Q9NX78 707 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 PI4KBQ9UBF8 816 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 TBC1D10BQ4KMP7 808 aaPredicted RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 TMOD4Q9NZQ9 345 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 KIF20BQ96Q89 1820 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 DLATP10515 647 aaKnown RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 CD19P15391 556 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 VPS41P49754 854 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 SLC7A5Q01650 507 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 PHF20Q9BVI0 1012 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 BHMT2Q9H2M3 363 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 ZCCHC17Q9NP64 241 aaKnown RBP17.89■□□□□ 0.45
SCAF1-201ENST00000360565 CCPG1Q9ULG6 757 aa17.89■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 SNAP25P60880 206 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L6PQ6QN14 398 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 LRRN2O75325 713 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 ECM2O94769 699 aaPredicted RBP17.88■□□□□ 0.45
SCAF1-201ENST00000360565 ATP5DP30049 168 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 HOXA13P31271 388 aaPredicted RBP17.88■□□□□ 0.45
SCAF1-201ENST00000360565 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms