RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 EPAS1Q99814 870 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 CADPS2Q86UW7 1296 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 SAP30BPQ9UHR5 308 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 FAM102BQ5T8I3 360 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 ATP11BQ9Y2G3 1177 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 COL4A3BPQ9Y5P4 624 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 H0Y626 953 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 TRIM16O95361 564 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 H2AFZP0C0S5 128 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 H2AFVQ71UI9 128 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RASSF7Q02833 373 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 ICE2Q659A1 982 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 KRT26Q7Z3Y9 468 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 KIF2CQ99661 725 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 NOSTRINQ8IVI9 506 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 PSMC1P62191 440 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 IGBP1P78318 339 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 FRA10AC1Q70Z53 315 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 SYT2Q8N9I0 419 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ARPP21Q9UBL0 812 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 TBK1Q9UHD2 729 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PA2G4Q9UQ80 394 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 HSPA4LO95757 839 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PDHA1P08559 390 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 KHDRBS2Q5VWX1 349 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PLCH2O75038 1416 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ZMYM3Q14202 1370 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ADAT2Q7Z6V5 191 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 WDR75Q8IWA0 830 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 APOBEC2Q9Y235 224 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 CALR3Q96L12 384 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MYO10Q9HD67 2058 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 LAD1O00515 517 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ZBED4O75132 1171 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PMLP29590 882 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 EMBQ6PCB8 327 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 IRAK4Q9NWZ3 460 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 FIS1Q9Y3D6 152 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MYL7Q01449 175 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 CNOT6LQ96LI5 555 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MRC2Q9UBG0 1479 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 CENPUQ71F23 418 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 DR1Q01658 176 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 UGGT2Q9NYU1 1516 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 IRS4O14654 1257 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MED7O43513 233 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 ESRRBO95718 433 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 TAF1BQ53T94 588 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 KRT40Q6A162 431 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 GDAP1Q8TB36 358 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 MRPL47Q9HD33 250 aaKnown RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-203ENST00000360280 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 SNX14Q9Y5W7 946 aa10.03□□□□□ -0.8
VPS13A-203ENST00000360280 PIK3C2GO75747 1445 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 WDR47O94967 919 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 PFKFB1P16118 471 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 MAPK4P31152 587 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 NNTQ13423 1086 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 CYP4F22Q6NT55 531 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 DLATP10515 647 aaKnown RBP10.02□□□□□ -0.8
VPS13A-203ENST00000360280 ATP2B4P23634 1241 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 ASPSCR1Q9BZE9 553 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 CUEDC2Q9H467 287 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 TLR3O15455 904 aaKnown RBP10.02□□□□□ -0.8
VPS13A-203ENST00000360280 CFLARO15519 480 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 POLGP54098 1239 aaPredicted RBP10.02□□□□□ -0.8
VPS13A-203ENST00000360280 PDIK1LQ8N165 341 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 ZSCAN32Q9NX65 697 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 PCDHA12Q9UN75 941 aa10.02□□□□□ -0.8
VPS13A-203ENST00000360280 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 ABL1P00519 1130 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.81
VPS13A-203ENST00000360280 ANO5Q75V66 913 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 FAM135BQ49AJ0 1406 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 KRT37O76014 449 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 PLTPP55058 493 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 ACAD11Q709F0 780 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 RANBP1P43487 201 aa10.02□□□□□ -0.81
VPS13A-203ENST00000360280 IFRD2Q12894 506 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms