RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SH3RF1Q7Z6J0 888 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 SLFN12Q8IYM2 578 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 GRAMD1CQ8IYS0 662 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 CEP57L1Q8IYX8 460 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 HOOK1Q9UJC3 728 aaKnown RBP26.15■■□□□ 1.78
SDF4-202ENST00000360001 PCDHA12Q9UN75 941 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 TRPM7Q96QT4 1865 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 POTEMA6NI47 508 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 BAATQ14032 418 aaPredicted RBP26.15■■□□□ 1.78
SDF4-202ENST00000360001 TAAR1Q96RJ0 339 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 UIMC1Q96RL1 719 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 ACAD9Q9H845 621 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 RABGAP1Q9Y3P9 1069 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 A0A087WWV3 80 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 PRR29P0C7W0 189 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 PABPC4Q13310 644 aaKnown RBP eCLIP26.14■■□□□ 1.777e-7■■■■□ 19.7
SDF4-202ENST00000360001 ANO6Q4KMQ2 910 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 IL31RAQ8NI17 732 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 PAGE5Q96GU1 130 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 MS4A4AQ96JQ5 239 aa26.14■■□□□ 1.77
SDF4-202ENST00000360001 MSH4O15457 936 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 STX1AQ16623 288 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 CEP55Q53EZ4 464 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 NAALADL2Q58DX5 795 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 CCDC39Q9UFE4 941 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 FAM20AQ96MK3 541 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 PCDHA5Q9Y5H7 936 aa26.13■■□□□ 1.77
SDF4-202ENST00000360001 CNMDO75829 334 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 OSBPP22059 807 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 STAT6P42226 847 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 RRAGBQ5VZM2 374 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 RIOX2Q8IUF8 465 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 CHST13Q8NET6 341 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 RASSF8Q8NHQ8 419 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 LRRC15Q8TF66 581 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 CCDC34Q96HJ3 373 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 MAF1Q9H063 256 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 SPATC1LQ9H0A9 340 aa26.12■■□□□ 1.77
SDF4-202ENST00000360001 A1CFQ9NQ94 594 aaKnown RBP26.12■■□□□ 1.77
SDF4-202ENST00000360001 MEIS1O00470 390 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 ZFP91Q96JP5 570 aaPredicted RBP26.11■■□□□ 1.77
SDF4-202ENST00000360001 PURBQ96QR8 312 aaKnown RBP26.11■■□□□ 1.77
SDF4-202ENST00000360001 DNAJC25Q9H1X3 360 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 CYP39A1Q9NYL5 469 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 BIN1O00499 593 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 PLCG1P19174 1290 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 AFMP43652 599 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 GTF2A2P52657 109 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 SPIRE1Q08AE8 756 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 MKRN3Q13064 507 aaKnown RBP26.11■■□□□ 1.77
SDF4-202ENST00000360001 ZRSR1Q15695 479 aaKnown RBP26.11■■□□□ 1.77
SDF4-202ENST00000360001 PCNX4Q63HM2 1172 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 PLA2G4DQ86XP0 818 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 RMDN3Q96TC7 470 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 PLIN2Q99541 437 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 MTRQ99707 1265 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 PXMP2Q9NR77 195 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 ANO10Q9NW15 660 aa26.11■■□□□ 1.77
SDF4-202ENST00000360001 CETPP11597 493 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 EIF2AK2P19525 551 aaKnown RBP26.1■■□□□ 1.77
SDF4-202ENST00000360001 NT5DC1Q5TFE4 455 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 SPRYD7Q5W111 196 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 SPATA20Q8TB22 786 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 MXRA8Q9BRK3 442 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 PAGR1Q9BTK6 254 aa26.1■■□□□ 1.77
SDF4-202ENST00000360001 PGM5Q15124 567 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 FAM200AQ8TCP9 573 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 NUDT12Q9BQG2 462 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 PDCD2LQ9BRP1 358 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 RBPJLQ9UBG7 517 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 ITGB5P18084 799 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 SARSP49591 514 aaKnown RBP26.09■■□□□ 1.77
SDF4-202ENST00000360001 MRPS9P82933 396 aaKnown RBP26.09■■□□□ 1.77
SDF4-202ENST00000360001 SETQ01105 290 aaPredicted RBP26.09■■□□□ 1.77
SDF4-202ENST00000360001 GRB10Q13322 594 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 KRT79Q5XKE5 535 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 C11orf57Q6ZUT1 292 aaPredicted RBP26.09■■□□□ 1.77
SDF4-202ENST00000360001 SNX29Q8TEQ0 813 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 TXNRD2Q9NNW7 524 aa26.09■■□□□ 1.77
SDF4-202ENST00000360001 CCL15-CCL14A0A0B4J2E2 113 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 ZBTB48P10074 688 aaPredicted RBP26.08■■□□□ 1.77
SDF4-202ENST00000360001 NLRP12P59046 1061 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 CCL15Q16663 113 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 BRI3BPQ8WY22 251 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 STAMQ92783 540 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 CALML4Q96GE6 196 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 PNMA5Q96PV4 448 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 CUEDC2Q9H467 287 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 VAV3Q9UKW4 847 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 LCTP09848 1927 aa26.08■■□□□ 1.77
SDF4-202ENST00000360001 ARP10275 920 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 CASP1P29466 404 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 DPYDQ12882 1025 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 ARHGEF16Q5VV41 709 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 NIPA1Q7RTP0 329 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 SLC5A5Q92911 643 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 MOV10L1Q9BXT6 1211 aaKnown RBP26.07■■□□□ 1.76
SDF4-202ENST00000360001 FBXO40Q9UH90 709 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 UBIAD1Q9Y5Z9 338 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 CAVIN2O95810 425 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms