RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 DBF4BQ8NFT6 615 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 TLE6Q9H808 572 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 FBXL21Q9UKT6 434 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 CTDP1Q9Y5B0 961 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 EMSYQ7Z589 1322 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 RAD50Q92878 1312 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 SRRM3A6NNA2 597 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 USP17L21D6R901 530 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 SPTLC1O15269 473 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 USP5P45974 858 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 TAPT1Q6NXT6 567 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 SIX5Q8N196 739 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 SPATA5Q8NB90 893 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 PLVAPQ9BX97 442 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 ERVK-5Q9HDB9 667 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 PLAGL2Q9UPG8 496 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 MYH7BA7E2Y1 1941 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
UBE2D3-205ENST00000350435 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 CIAO1O76071 339 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 RFX5P48382 616 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 TIMM10P62072 90 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 MVPQ14764 893 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 WDR43Q15061 677 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 GDF6Q6KF10 455 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 MIER1Q8N108 512 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-205ENST00000350435 LOC400499M0QZD8 3231 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 EIF4E1BA6NMX2 242 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 RAD21O60216 631 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 SPECC1Q5M775 1068 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 ZNF618Q5T7W0 954 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 C1orf210Q8IVY1 113 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 CLP1Q92989 425 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 P2RX5Q93086 422 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 CTAGE1Q96RT6 745 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 APOL5Q9BWW9 433 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 S1PR5Q9H228 398 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 VTA1Q9NP79 307 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 LIMD1Q9UGP4 676 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 GMEB2Q9UKD1 530 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 COG6Q9Y2V7 657 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 PLXNA4Q9HCM2 1894 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 RALGAPA1Q6GYQ0 2036 aa10.89□□□□□ -0.67
UBE2D3-205ENST00000350435 ADGRA3Q8IWK6 1321 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 CACNA1IQ9P0X4 2223 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 TGM1P22735 817 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 DNAJB1P25685 340 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 TECP42680 631 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 PLCD1P51178 756 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 ICA1Q05084 483 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 NAALADL2Q58DX5 795 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 WDFY3Q8IZQ1 3526 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 PLCD3Q8N3E9 789 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 TDRD5Q8NAT2 981 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 SLF1Q9BQI6 1058 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
UBE2D3-205ENST00000350435 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 PER2O15055 1255 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 ZBED4O75132 1171 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 PLEKHG4Q58EX7 1191 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 FAM83BQ5T0W9 1011 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 ANKRD54Q6NXT1 300 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 CLEC10AQ8IUN9 316 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 ZDHHC14Q8IZN3 488 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 MICAL1Q8TDZ2 1067 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 ATRIPQ8WXE1 791 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 SEPT8Q92599 483 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms