RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TMTC4Q5T4D3 741 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 TRIM42Q8IWZ5 723 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 UBN1Q9NPG3 1134 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 MYOM2P54296 1465 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 ACTN1P12814 892 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 FAM196AQ6ZSG2 479 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 SMAP1Q8IYB5 467 aaPredicted RBP25.1■■□□□ 1.61
NPAS3-201ENST00000346562 RIPOR2Q9Y4F9 1068 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 MAPK4P31152 587 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 SPDYE2BA6NHP3 402 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 BAG2O95816 211 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 CPP00450 1065 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 SPDYE6P0CI01 402 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 MESDQ14696 234 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 PDZD8Q8NEN9 1154 aa25.1■■□□□ 1.61
NPAS3-201ENST00000346562 NR2F2P24468 414 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 INPP1P49441 399 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 CDR2Q01850 454 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 PCDHA7Q9UN72 937 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 SH3BGRP55822 239 aaPredicted RBP25.09■■□□□ 1.61
NPAS3-201ENST00000346562 UBXN2AP68543 259 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 KCTD1Q719H9 257 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 FAM149B1Q96BN6 582 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 DHTKD1Q96HY7 919 aaPredicted RBP25.09■■□□□ 1.61
NPAS3-201ENST00000346562 CLIC6Q96NY7 704 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 USP44Q9H0E7 712 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 PDIA3P30101 505 aaKnown RBP25.09■■□□□ 1.61
NPAS3-201ENST00000346562 IL6STP40189 918 aaPredicted RBP25.09■■□□□ 1.61
NPAS3-201ENST00000346562 LMCD1Q9NZU5 365 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 KCNQ3O43525 872 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 PPFIA2O75334 1257 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 PHKA1P46020 1223 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 STAT2P52630 851 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 FAM186BQ8IYM0 893 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 MCUQ8NE86 351 aa25.09■■□□□ 1.61
NPAS3-201ENST00000346562 DHX36Q9H2U1 1008 aaKnown RBP25.09■■□□□ 1.61
NPAS3-201ENST00000346562 MCF2LO15068 1137 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 IREB2P48200 963 aaKnown RBP25.08■■□□□ 1.61
NPAS3-201ENST00000346562 THOC5Q13769 683 aaKnown RBP25.08■■□□□ 1.61
NPAS3-201ENST00000346562 RNF26Q9BY78 433 aaPredicted RBP25.08■■□□□ 1.61
NPAS3-201ENST00000346562 BBOX1O75936 387 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 SERPINB2P05120 415 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 CFAP61Q8NHU2 1237 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 ZNF653Q96CK0 615 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 PPP6R2O75170 966 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 PSAPP07602 524 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 IL9RQ01113 521 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 Q3C1V9 767 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 CEP170P1Q96L14 293 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 IRAK4Q9NWZ3 460 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 PTPN22Q9Y2R2 807 aa25.08■■□□□ 1.61
NPAS3-201ENST00000346562 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.61
NPAS3-201ENST00000346562 WDR64B1ANS9 1081 aa25.08■■□□□ 1.6
NPAS3-201ENST00000346562 SYDE2Q5VT97 1194 aa25.08■■□□□ 1.6
NPAS3-201ENST00000346562 CLIC4Q9Y696 253 aa25.08■■□□□ 1.6
NPAS3-201ENST00000346562 CFAP43Q8NDM7 1665 aa25.08■■□□□ 1.6
NPAS3-201ENST00000346562 PER1O15534 1290 aaPredicted RBP25.07■■□□□ 1.6
NPAS3-201ENST00000346562 BMP3P12645 472 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 SURF1Q15526 300 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 CCNYQ8ND76 341 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 HIP1RO75146 1068 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 RASSF7Q02833 373 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 FANCLQ9NW38 375 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 KRT1P04264 644 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 ARPP19P56211 112 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 ARHGEF18Q6ZSZ5 1173 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 KDM5AP29375 1690 aaKnown RBP25.07■■□□□ 1.6
NPAS3-201ENST00000346562 GSDMAQ96QA5 445 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 TUBGCP2Q9BSJ2 902 aa25.07■■□□□ 1.6
NPAS3-201ENST00000346562 EFCAB8A8MWE9 144 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 SERPINB6P35237 376 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 SIX6OS1Q8N1H7 587 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 SPDYE1Q8NFV5 336 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 CAPS2Q9BXY5 557 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 INSRP06213 1382 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 FAM135BQ49AJ0 1406 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 OPHN1O60890 802 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 SMIM24O75264 130 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 EEF1GP26641 437 aaKnown RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 NDUFA8P51970 172 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 PDE1CQ14123 709 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 MYLK4Q86YV6 388 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 DCLK2Q8N568 766 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 LRRC4Q9HBW1 653 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 EPN1Q9Y6I3 576 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 RGS12O14924 1447 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 GDF11O95390 407 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 HOXA7P31268 230 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 IL17REQ8NFR9 667 aa25.06■■□□□ 1.6
NPAS3-201ENST00000346562 MRPL47Q9HD33 250 aaKnown RBP25.06■■□□□ 1.6
NPAS3-201ENST00000346562 ZFYVE16Q7Z3T8 1539 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 POC1B-GALNT4F8VUJ3 575 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 CCHCR1Q8TD31 782 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 TTI1O43156 1089 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 RXRBP28702 533 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 IL1RL1Q01638 556 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 EHHADHQ08426 723 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms