RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 BFSP2Q13515 415 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 VSIG10LQ86VR7 867 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 CCDC155Q8N6L0 562 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 PDCD2LQ9BRP1 358 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
CKLF-202ENST00000345436 SLC27A2O14975 620 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 STAM2O75886 525 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 ARIH2O95376 493 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 ACRP10323 421 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 CCL23P55773 120 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 CHMP4BP1P59074 171 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 GNPTABQ3T906 1256 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 FCHSD1Q86WN1 690 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 HERVK_113Q902F9 699 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 EMID1Q96A84 441 aaPredicted RBP20.56■□□□□ 0.88
CKLF-202ENST00000345436 SPZ1Q9BXG8 430 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 LY9Q9HBG7 655 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 MSRAQ9UJ68 235 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
CKLF-202ENST00000345436 PPP1R11O60927 126 aaPredicted RBP20.55■□□□□ 0.88
CKLF-202ENST00000345436 MMP3P08254 477 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 ACTN1P12814 892 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
CKLF-202ENST00000345436 RFC2P35250 354 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 ANTXR2P58335 489 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 ARHGAP1Q07960 439 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 NECTIN1Q15223 517 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 TRMT13Q9NUP7 481 aaKnown RBP20.55■□□□□ 0.88
CKLF-202ENST00000345436 TAF6LQ9Y6J9 622 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 LRRC37A2A6NM11 1700 aa20.55■□□□□ 0.88
CKLF-202ENST00000345436 OPLAHO14841 1288 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 CYTH3O43739 400 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 PPFIA4O75335 1185 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 PGM5Q15124 567 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 RAB30Q15771 203 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 C16orf59Q7L2K0 433 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 PPTC7Q8NI37 304 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 SMARCC2Q8TAQ2 1214 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 TIFAQ96CG3 184 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 GUCD1Q96NT3 240 aa20.54■□□□□ 0.88
CKLF-202ENST00000345436 CDX2Q99626 313 aaPredicted RBP20.54■□□□□ 0.88
CKLF-202ENST00000345436 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 SH2B2O14492 632 aaPredicted RBP20.53■□□□□ 0.88
CKLF-202ENST00000345436 CYP2C9P11712 490 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 DNAJB2P25686 324 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 KRT32Q14532 448 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 C7orf31Q8N865 590 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 MLXIPQ9HAP2 919 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 LCTP09848 1927 aa20.53■□□□□ 0.88
CKLF-202ENST00000345436 CDC45O75419 566 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 PARNO95453 639 aaKnown RBP20.52■□□□□ 0.88
CKLF-202ENST00000345436 PTGISQ16647 500 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 RASIP1Q5U651 963 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 SESTD1Q86VW0 696 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 CCDC136Q96JN2 1154 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 SLC4A7Q9Y6M7 1214 aa20.52■□□□□ 0.88
CKLF-202ENST00000345436 HMGB1P09429 215 aaKnown RBP20.51■□□□□ 0.87
CKLF-202ENST00000345436 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
CKLF-202ENST00000345436 OTOP2Q7RTS6 562 aa20.51■□□□□ 0.87
CKLF-202ENST00000345436 CAGE1Q8TC20 777 aa20.51■□□□□ 0.87
CKLF-202ENST00000345436 SPATA33Q96N06 139 aa20.51■□□□□ 0.87
CKLF-202ENST00000345436 NEK1Q96PY6 1258 aa20.51■□□□□ 0.87
CKLF-202ENST00000345436 UMODL1Q5DID0 1318 aa20.51■□□□□ 0.87
CKLF-202ENST00000345436 LAMA2P24043 3122 aaKnown RBP20.5■□□□□ 0.87
CKLF-202ENST00000345436 ZBBXA8MT70 800 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 NEDD9Q14511 834 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 WNT8AQ9H1J5 351 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 ZNF576Q9H609 170 aa20.5■□□□□ 0.87
CKLF-202ENST00000345436 MYH6P13533 1939 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 PIK3CDO00329 1044 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
CKLF-202ENST00000345436 GGPS1O95749 300 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 FOSL2P15408 326 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 PSEN2P49810 448 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 SLC35G1Q2M3R5 365 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 NLRX1Q86UT6 975 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 GIMAP8Q8ND71 665 aaPredicted RBP20.49■□□□□ 0.87
CKLF-202ENST00000345436 AFAP1L1Q8TED9 768 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 SCLYQ96I15 445 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.872e-10■■□□□ 12.3
CKLF-202ENST00000345436 TTYH1Q9H313 450 aaPredicted RBP20.49■□□□□ 0.87
CKLF-202ENST00000345436 PSTPIP2Q9H939 334 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 EHMT1Q9H9B1 1298 aa20.49■□□□□ 0.87
CKLF-202ENST00000345436 RBM28Q9NW13 759 aaKnown RBP20.49■□□□□ 0.87
CKLF-202ENST00000345436 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
CKLF-202ENST00000345436 FGD1P98174 961 aa20.48■□□□□ 0.87
CKLF-202ENST00000345436 MFSD10Q14728 455 aa20.48■□□□□ 0.87
CKLF-202ENST00000345436 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
CKLF-202ENST00000345436 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
CKLF-202ENST00000345436 TEX2Q8IWB9 1127 aa20.48■□□□□ 0.87
CKLF-202ENST00000345436 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms