RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 SNAP23O00161 211 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 PCP11498 1178 aaKnown RBP17.97■□□□□ 0.47
UPK3B-202ENST00000334348 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
UPK3B-202ENST00000334348 HSPA9P38646 679 aaKnown RBP17.97■□□□□ 0.47
UPK3B-202ENST00000334348 STK4Q13043 487 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 COBLL1Q53SF7 1204 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 LRIG3Q6UXM1 1119 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 CCDC121Q6ZUS5 278 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 BANK1Q8NDB2 785 aa17.97■□□□□ 0.47
UPK3B-202ENST00000334348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.97■□□□□ 0.47
UPK3B-202ENST00000334348 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
UPK3B-202ENST00000334348 CCDC84Q86UT8 332 aaPredicted RBP17.96■□□□□ 0.47
UPK3B-202ENST00000334348 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 ANKRD13CQ8N6S4 541 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 LRRC15Q8TF66 581 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 ACSBG1Q96GR2 724 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 PLIN2Q99541 437 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 FAM207AQ9NSI2 230 aaPredicted RBP17.96■□□□□ 0.47
UPK3B-202ENST00000334348 PLAAQ9Y263 795 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 LRP5O75197 1615 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 SSU72P8A0A1W2PR75 194 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 LRRC53A6NM62 1247 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 NF2P35240 595 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 RASSF7Q02833 373 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 CDC37Q16543 378 aaPredicted RBP17.96■□□□□ 0.47
UPK3B-202ENST00000334348 ADGRA1Q86SQ6 560 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 MAGEC3Q8TD91 643 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 CCDC114Q96M63 670 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 TRIM9Q9C026 710 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 TMEM60Q9H2L4 133 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 NDST4Q9H3R1 872 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
UPK3B-202ENST00000334348 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 GOLGA6L10A6NI86 522 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 BUB1O43683 1085 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 BCAMP50895 628 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 RRAGAQ7L523 313 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 EIF1ADQ8N9N8 165 aaKnown RBP17.95■□□□□ 0.46
UPK3B-202ENST00000334348 C7orf25Q9BPX7 421 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 FAM205AQ6ZU69 1335 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 RBAK-RBAKDNI3L0D1 243 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 SNCBQ16143 134 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 CCDC178Q5BJE1 867 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 MAATS1Q7Z4T9 603 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 BAP1Q92560 729 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 KRT12Q99456 494 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 CENPHQ9H3R5 247 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 PPANQ9NQ55 473 aaKnown RBP17.95■□□□□ 0.46
UPK3B-202ENST00000334348 SH3GLB2Q9NR46 395 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 ODF2LQ9ULJ1 636 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 PCDHA4Q9UN74 947 aa17.95■□□□□ 0.46
UPK3B-202ENST00000334348 KCNQ2O43526 872 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 GFPT1Q06210 699 aaPredicted RBP17.94■□□□□ 0.46
UPK3B-202ENST00000334348 PARP9Q8IXQ6 854 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 CDCA7Q9BWT1 371 aaPredicted RBP17.94■□□□□ 0.46
UPK3B-202ENST00000334348 EDEM3Q9BZQ6 932 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 VEZTQ9HBM0 779 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 DDX20Q9UHI6 824 aaKnown RBP17.94■□□□□ 0.46
UPK3B-202ENST00000334348 LAD1O00515 517 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 MYBP10242 640 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 FCER1AP12319 257 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 PRPHP41219 470 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 SLC1A4P43007 532 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 CENPPQ6IPU0 288 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 PDXDC1Q6P996 788 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 CYB5D1Q6P9G0 228 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 FUKQ8N0W3 1084 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 SEMA6BQ9H3T3 888 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 ABCB11O95342 1321 aa17.94■□□□□ 0.46
UPK3B-202ENST00000334348 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 GCOM1H8Y6P7 765 aaPredicted RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 M0R2N6 131 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 MYZAPP0CAP1 466 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 PLCG1P19174 1290 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 ASIC1P78348 528 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 MAN2A1Q16706 1144 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 CNNM4Q6P4Q7 775 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 N4BP2L2Q92802 583 aaPredicted RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 MIEF2Q96C03 454 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 RIOK1Q9BRS2 568 aaKnown RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 SLC12A6Q9UHW9 1150 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 FLT1P17948 1338 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 CCDC194A0A1B0GVG4 234 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 TRAPPC3O43617 180 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 STARD3NLO95772 234 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 HPDP32754 393 aaPredicted RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 MRPL12P52815 198 aaKnown RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 SGSM3Q96HU1 749 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 INPP4AQ96PE3 977 aaPredicted RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 OSBPL7Q9BZF2 842 aa17.93■□□□□ 0.46
UPK3B-202ENST00000334348 TAF1DQ9H5J8 278 aaPredicted RBP17.93■□□□□ 0.46
UPK3B-202ENST00000334348 PALMO75781 387 aa17.92■□□□□ 0.46
UPK3B-202ENST00000334348 ANKRD20A8PQ5CZ79 823 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms