RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TRIM42Q8IWZ5 723 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 CNBD1Q8NA66 436 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 TRIM58Q8NG06 486 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 RASSF8Q8NHQ8 419 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 ATRIPQ8WXE1 791 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 ADD3Q9UEY8 706 aaKnown RBP18.94■□□□□ 0.62
PRKCD-201ENST00000330452 CTNND2Q9UQB3 1225 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 BMP15O95972 392 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 CDC25AP30304 524 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 ALS2CR12Q96Q35 445 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 MTRQ99707 1265 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 CRNKL1Q9BZJ0 848 aaKnown RBP18.93■□□□□ 0.62
PRKCD-201ENST00000330452 MYH13Q9UKX3 1938 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 RREB1Q92766 1687 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 ORC4O43929 436 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 PCP11498 1178 aaKnown RBP18.93■□□□□ 0.62
PRKCD-201ENST00000330452 HIBADHP31937 336 aaKnown RBP18.93■□□□□ 0.62
PRKCD-201ENST00000330452 GCLCP48506 637 aaPredicted RBP18.93■□□□□ 0.62
PRKCD-201ENST00000330452 MFSD4BQ5TF39 518 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 CDKAL1Q5VV42 579 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 COG1Q8WTW3 980 aa18.93■□□□□ 0.62
PRKCD-201ENST00000330452 PAPOLBQ9NRJ5 636 aaKnown RBP18.93■□□□□ 0.62
PRKCD-201ENST00000330452 RNF8O76064 485 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 TFRCP02786 760 aaKnown RBP18.92■□□□□ 0.62
PRKCD-201ENST00000330452 RC3H1Q5TC82 1133 aaKnown RBP18.92■□□□□ 0.62
PRKCD-201ENST00000330452 RAD9BQ6WBX8 426 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 PROM2Q8N271 834 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 CCDC114Q96M63 670 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
PRKCD-201ENST00000330452 PPFIBP1Q86W92 1011 aa18.92■□□□□ 0.62
PRKCD-201ENST00000330452 RBM17Q96I25 401 aaKnown RBP18.92■□□□□ 0.62
PRKCD-201ENST00000330452 TSPYL2Q9H2G4 693 aaPredicted RBP18.92■□□□□ 0.62
PRKCD-201ENST00000330452 LINGO3P0C6S8 592 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 CDC25CP30307 473 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 PBX1P40424 430 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 PRR5LQ6MZQ0 368 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 GPKOWQ92917 476 aaPredicted RBP eCLIP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 LZTS2Q9BRK4 669 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 LZTFL1Q9NQ48 299 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 FERP16591 822 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 RRAGBQ5VZM2 374 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 NOA1Q8NC60 698 aaKnown RBP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 PROCA1Q8NCQ7 364 aaPredicted RBP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 ATL2Q8NHH9 583 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 RASGRP4Q8TDF6 673 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 BICD1Q96G01 975 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 NYXQ9GZU5 481 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 MMADHCQ9H3L0 296 aaPredicted RBP18.91■□□□□ 0.62
PRKCD-201ENST00000330452 EBF2Q9HAK2 575 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 MCM9Q9NXL9 1143 aa18.91■□□□□ 0.62
PRKCD-201ENST00000330452 GOLGA6L7A0A1B0GV03 622 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 GYS1P13807 737 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 CASP14P31944 242 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 MAGEA10P43363 369 aaPredicted RBP18.9■□□□□ 0.62
PRKCD-201ENST00000330452 DRP2Q13474 957 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 DIXDC1Q155Q3 683 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 PANX2Q96RD6 677 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 HAUS2Q9NVX0 235 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 A0A1B0GUL6 1792 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 MYO1EQ12965 1108 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 KRT27Q7Z3Y8 459 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 RBM41Q96IZ5 413 aaKnown RBP18.9■□□□□ 0.62
PRKCD-201ENST00000330452 NUP58Q9BVL2 599 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 MAPK8IP1Q9UQF2 711 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 FAM205AQ6ZU69 1335 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 SCN7AQ01118 1682 aa18.9■□□□□ 0.62
PRKCD-201ENST00000330452 CTAGE15A4D2H0 777 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 SEMA3EO15041 775 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 CTAGE8P0CG41 777 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 GNAT1P11488 350 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 PAX3P23760 479 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 SCNN1BP51168 640 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 RASA3Q14644 834 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 MTHFD1LQ6UB35 978 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 CTAGE6Q86UF2 777 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 CTAGE4Q8IX94 777 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 STAG2Q8N3U4 1231 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 STAMBPL1Q96FJ0 436 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 ZCWPW1Q9H0M4 648 aa18.89■□□□□ 0.62
PRKCD-201ENST00000330452 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.62
PRKCD-201ENST00000330452 KIF4AO95239 1232 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 CCDC175P0C221 793 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
PRKCD-201ENST00000330452 PDCLQ13371 301 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 NAA35Q5VZE5 725 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 MTMR7Q9Y216 660 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 ADGRG1Q9Y653 693 aa18.89■□□□□ 0.61
PRKCD-201ENST00000330452 A0A1B0GVG6 124 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 TFAP4Q01664 338 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 TMEM132AQ24JP5 1023 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms