RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FBXL16Q8N461 479 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 SLC43A3Q8NBI5 491 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 MRVI1Q9Y6F6 885 aa31.84■■■□□ 2.69
ATPAF1-201ENST00000329231 hCG_1642624A0A1W2PR95 340 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 A6NJR5 290 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 PIK3CDO00329 1044 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 TLR3O15455 904 aaKnown RBP31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 SLC34A2O95436 690 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 GH1P01241 217 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 MYL3P08590 195 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 CASTP20810 708 aaKnown RBP31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 LY6KQ17RY6 165 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 BRF1Q92994 677 aa31.83■■■□□ 2.69
ATPAF1-201ENST00000329231 CNTNAP5Q8WYK1 1306 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 RAG1P15918 1043 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 PURAQ00577 322 aaKnown RBP31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 KCNV1Q6PIU1 500 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 FAM126BQ8IXS8 530 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 IL31RAQ8NI17 732 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 BADQ92934 168 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 PSTPIP2Q9H939 334 aa31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 DDX41Q9UJV9 622 aaKnown RBP31.82■■■□□ 2.68
ATPAF1-201ENST00000329231 CCDC196A0A1B0GTZ2 297 aa31.81■■■□□ 2.68
ATPAF1-201ENST00000329231 APOBRQ0VD83 1088 aa31.81■■■□□ 2.68
ATPAF1-201ENST00000329231 USP17L6PQ6QN14 398 aa31.81■■■□□ 2.68
ATPAF1-201ENST00000329231 HEATR3Q7Z4Q2 680 aa31.81■■■□□ 2.68
ATPAF1-201ENST00000329231 MTG1Q9BT17 334 aaPredicted RBP31.81■■■□□ 2.68
ATPAF1-201ENST00000329231 FRMPD4Q14CM0 1322 aa31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 MEIS2O14770 477 aa31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 METAP2P50579 478 aaKnown RBP eCLIP31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 PSMC6P62333 389 aa31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 FUT2Q10981 343 aa31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 TBX21Q9UL17 535 aa31.8■■■□□ 2.68
ATPAF1-201ENST00000329231 GRIN2DO15399 1336 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 STAM2O75886 525 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 RGS20O76081 388 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 ARHGAP1Q07960 439 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 AFG1LQ8WV93 481 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 AGXT2Q9BYV1 514 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 FAM217BQ9NTX9 383 aaPredicted RBP31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 LTBP2Q14767 1821 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 KIAA1217Q5T5P2 1943 aa31.79■■■□□ 2.68
ATPAF1-201ENST00000329231 TGFB3P10600 412 aa31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 ITGB8P26012 769 aa31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 CDC27P30260 824 aa31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 RUFY3Q7L099 469 aa31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 EMID1Q96A84 441 aaPredicted RBP31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 ZSWIM6Q9HCJ5 1215 aa31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 V9GY48 417 aaPredicted RBP31.78■■■□□ 2.68
ATPAF1-201ENST00000329231 CD4P01730 458 aa31.77■■■□□ 2.68
ATPAF1-201ENST00000329231 LAMC2Q13753 1193 aa31.77■■■□□ 2.68
ATPAF1-201ENST00000329231 GPKOWQ92917 476 aaPredicted RBP eCLIP31.77■■■□□ 2.68
ATPAF1-201ENST00000329231 CYP46A1Q9Y6A2 500 aa31.77■■■□□ 2.68
ATPAF1-201ENST00000329231 TIMP1P01033 207 aa31.76■■■□□ 2.67
ATPAF1-201ENST00000329231 GNPTABQ3T906 1256 aa31.76■■■□□ 2.67
ATPAF1-201ENST00000329231 XRRA1Q6P2D8 792 aa31.76■■■□□ 2.67
ATPAF1-201ENST00000329231 DHX37Q8IY37 1157 aaKnown RBP31.76■■■□□ 2.67
ATPAF1-201ENST00000329231 TM6SF1Q9BZW5 370 aa31.76■■■□□ 2.67
ATPAF1-201ENST00000329231 hCG_1984214I3L0E3 225 aa31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 MMP3P08254 477 aa31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 ADD1P35611 737 aaKnown RBP31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 LRIT3Q3SXY7 679 aa31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 WWC2Q6AWC2 1192 aa31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 ZNF713Q8N859 430 aaPredicted RBP31.75■■■□□ 2.67
ATPAF1-201ENST00000329231 NID2Q14112 1375 aa31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 NAPAP54920 295 aa31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 MRPS9P82933 396 aaKnown RBP31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 PCNX4Q63HM2 1172 aa31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 PPP1R18Q6NYC8 613 aa31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 TEX2Q8IWB9 1127 aa31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 ZFP91Q96JP5 570 aaPredicted RBP31.74■■■□□ 2.67
ATPAF1-201ENST00000329231 DGKDQ16760 1214 aa31.73■■■□□ 2.67
ATPAF1-201ENST00000329231 CELF3Q5SZQ8 465 aaKnown RBP31.73■■■□□ 2.67
ATPAF1-201ENST00000329231 PPTC7Q8NI37 304 aa31.73■■■□□ 2.67
ATPAF1-201ENST00000329231 INPP4AQ96PE3 977 aaPredicted RBP31.73■■■□□ 2.67
ATPAF1-201ENST00000329231 ALDH8A1Q9H2A2 487 aaPredicted RBP31.73■■■□□ 2.67
ATPAF1-201ENST00000329231 SPDYE3A6NKU9 549 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 B4GALT4O60513 344 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 EIF5BO60841 1220 aaKnown RBP31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 EVCP57679 992 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 FPGSQ05932 587 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 UBE2SQ16763 222 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 NBPF20Q3BBV1 942 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 NFRKBQ6P4R8 1299 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 TRPV6Q9H1D0 765 aa31.72■■■□□ 2.67
ATPAF1-201ENST00000329231 GGPS1O95749 300 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 UBA1P22314 1058 aaKnown RBP31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 ICAM3P32942 547 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 MYSM1Q5VVJ2 828 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 MFSD5Q6N075 450 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 BARHL2Q9NY43 387 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 RTEL1Q9NZ71 1219 aa31.71■■■□□ 2.67
ATPAF1-201ENST00000329231 STXBP3O00186 592 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 SOX1O00570 391 aaPredicted RBP31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 SUPT20HL2P0C7V6 817 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 SP2Q02086 613 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 FAM47CQ5HY64 1035 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 SPATA33Q96N06 139 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 PPP1R12CQ9BZL4 782 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 EHMT1Q9H9B1 1298 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms