RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 MGAMO43451 1857 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CTDNEP1O95476 244 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 F13A1P00488 732 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 NR3C2P08235 984 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CYP2C8P10632 490 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CPT1AP50416 773 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CEP55Q53EZ4 464 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 SAMD1Q6SPF0 538 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 DNAJC5GQ8N7S2 189 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 SENP2Q9HC62 589 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 VPS54Q9P1Q0 977 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC39Q9UFE4 941 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 SMIM22K7EJ46 135 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 GAS2O43903 313 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 PPP6R2O75170 966 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 BRD1O95696 1058 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 RXRAP19793 462 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 SF3A1Q15459 793 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 VSIG10LQ86VR7 867 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF579Q8NAF0 562 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 SLC17A8Q8NDX2 589 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 NT5C3AQ9H0P0 336 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 FAM13BQ9NYF5 915 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ADCY3O60266 1144 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 NEMFO60524 1076 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 HSPA1AP0DMV8 641 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 HSPA1BP0DMV9 641 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 SYT1P21579 422 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 LONP1P36776 959 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 PDIA5Q14554 519 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 MIS18BP1Q6P0N0 1132 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 PLA2G4DQ86XP0 818 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ATP6V0A1Q93050 837 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 MAML3Q96JK9 1138 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 INPP4AQ96PE3 977 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 HMX1Q9NP08 348 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF215Q9UL58 517 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 RBM19Q9Y4C8 960 aaKnown RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 COL1A2P08123 1366 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ELP1O95163 1332 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 GOLGA6L4A6NEF3 574 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 DDX11L8A8MPP1 907 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 CUTAO60888 179 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 OR52Z1P0C646 297 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 GNAT1P11488 350 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 CST5P28325 142 aaPredicted RBP5.85□□□□□ -1.47
LRIT3-201ENST00000327908 GRK4P32298 578 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 PGM5Q15124 567 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 STK38Q15208 465 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 MYSM1Q5VVJ2 828 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 KANK3Q6NY19 840 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC155Q8N6L0 562 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 TMEM106CQ9BVX2 250 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 PTPN22Q9Y2R2 807 aa5.85□□□□□ -1.47
LRIT3-201ENST00000327908 LRRC37A2A6NM11 1700 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 MEIS2O14770 477 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 DUSP11O75319 330 aaKnown RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 LARGE1O95461 756 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 RARBP10826 455 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 FDPSP14324 419 aaKnown RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 SHROOM1Q2M3G4 852 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 ARMCX2Q7L311 632 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 CD99L2Q8TCZ2 262 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 GPKOWQ92917 476 aaPredicted RBP eCLIP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 UPF3AQ9H1J1 476 aaKnown RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 TSHZ2Q9NRE2 1034 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 DDX25Q9UHL0 483 aaKnown RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 FZD1Q9UP38 647 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 MTMR6Q9Y217 621 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 MRVI1Q9Y6F6 885 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 MROH7Q68CQ1 1323 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 COL11A1P12107 1806 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 WDR64B1ANS9 1081 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 H0YCG3 227 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 M0R2N6 131 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 SEPT4O43236 478 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 JAK2O60674 1132 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 CAND2O75155 1236 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 PARNO95453 639 aaKnown RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 MYL1P05976 194 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 PSAPP07602 524 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 NASPP49321 788 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 RESTQ13127 1097 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 CALCRLQ16602 461 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 CLEC17AQ6ZS10 378 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 RNF180Q86T96 592 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF296Q8WUU4 475 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 SYAP1Q96A49 352 aaPredicted RBP5.84□□□□□ -1.47
LRIT3-201ENST00000327908 TUFT1Q9NNX1 390 aa5.84□□□□□ -1.47
LRIT3-201ENST00000327908 GJD2Q9UKL4 321 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms