RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ATP1A2P50993 1020 aa18.51■□□□□ 0.55
SSH1-201ENST00000326470 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
SSH1-201ENST00000326470 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
SSH1-201ENST00000326470 MMTAG2Q9BU76 263 aaKnown RBP18.51■□□□□ 0.55
SSH1-201ENST00000326470 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
SSH1-201ENST00000326470 MYH1P12882 1939 aa18.51■□□□□ 0.55
SSH1-201ENST00000326470 RBAK-RBAKDNI3L0D1 243 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 BUB1O43683 1085 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 FAM153BP0C7A2 387 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 LSP1P33241 339 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 LETM2Q2VYF4 491 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 FAM153CQ494X1 144 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 HGSNATQ68CP4 663 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 KRT25Q7Z3Z0 450 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 FBXO33Q7Z6M2 555 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 RNPC3Q96LT9 517 aaKnown RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 EPN3Q9H201 632 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 FAM153AQ9UHL3 310 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 MEFVO15553 781 aaPredicted RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 KIAA0754O94854 1291 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 HEXIM1O94992 359 aaKnown RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 TECP42680 631 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 SLC1A4P43007 532 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 ARHGAP27Q6ZUM4 889 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 UNC13DQ70J99 1090 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 C1orf131Q8NDD1 294 aaKnown RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 MCM9Q9NXL9 1143 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 MINPP1Q9UNW1 487 aa18.5■□□□□ 0.55
SSH1-201ENST00000326470 THRAP3Q9Y2W1 955 aaKnown RBP18.5■□□□□ 0.55
SSH1-201ENST00000326470 LAMB2P55268 1798 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 SCN7AQ01118 1682 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 PVALEFA0A1B0GWK0 134 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 FNTAP49354 379 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 GUCY2DQ02846 1103 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 LRRC63Q05C16 580 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 NONOQ15233 471 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSH1-201ENST00000326470 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 OTUD6BQ8N6M0 293 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 PIK3R5Q8WYR1 880 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 CASZ1Q86V15 1759 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 FSBPO95073 299 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 NAP1L1P55209 391 aaKnown RBP18.49■□□□□ 0.55
SSH1-201ENST00000326470 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 IFT81Q8WYA0 676 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 MYCBPQ99417 103 aaPredicted RBP18.49■□□□□ 0.55
SSH1-201ENST00000326470 CAPN7Q9Y6W3 813 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 KAT6BQ8WYB5 2073 aa18.49■□□□□ 0.55
SSH1-201ENST00000326470 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
SSH1-201ENST00000326470 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 YTHDF3Q7Z739 585 aaKnown RBP18.48■□□□□ 0.55
SSH1-201ENST00000326470 ESYT3A0FGR9 886 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 PALM3A6NDB9 673 aaPredicted RBP18.48■□□□□ 0.55
SSH1-201ENST00000326470 ZSCAN5CA6NGD5 496 aaPredicted RBP18.48■□□□□ 0.55
SSH1-201ENST00000326470 MYMKA6NI61 221 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 NR1D1P20393 614 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 MNAT1P51948 309 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 NAA35Q5VZE5 725 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 MICALCLQ6ZW33 695 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 CCDC91Q7Z6B0 441 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 NEK8Q86SG6 692 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 BLOC1S4Q9NUP1 217 aa18.48■□□□□ 0.55
SSH1-201ENST00000326470 PPP1R37O75864 691 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 PRDX5P30044 214 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 ATP2B2Q01814 1243 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 GUCY1A3Q02108 690 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 TDRD12Q587J7 1177 aaKnown RBP18.47■□□□□ 0.55
SSH1-201ENST00000326470 C12orf60Q5U649 245 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 LZTS2Q9BRK4 669 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 NUCKS1Q9H1E3 243 aaKnown RBP18.47■□□□□ 0.55
SSH1-201ENST00000326470 PALMO75781 387 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 KCNMA1Q12791 1236 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 GRB10Q13322 594 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 SLC9C1Q4G0N8 1177 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
SSH1-201ENST00000326470 ATP6V1G3Q96LB4 118 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 STK17AQ9UEE5 414 aa18.47■□□□□ 0.55
SSH1-201ENST00000326470 USP17L3A6NCW0 530 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 USP17L4A6NCW7 530 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 NAPAP54920 295 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 SF3B3Q15393 1217 aaKnown RBP18.46■□□□□ 0.55
SSH1-201ENST00000326470 NAB2Q15742 525 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 CDC37Q16543 378 aaPredicted RBP18.46■□□□□ 0.55
SSH1-201ENST00000326470 PTGISQ16647 500 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 FOXR2Q6PJQ5 311 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 USP17L1Q7RTZ2 530 aa18.46■□□□□ 0.55
SSH1-201ENST00000326470 LUC7LQ9NQ29 371 aaKnown RBP18.46■□□□□ 0.55
SSH1-201ENST00000326470 SRRM3A6NNA2 597 aaPredicted RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 HMGB1P1B2RPK0 211 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms