RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
CCDC8-201ENST00000307522 HIBCHQ6NVY1 386 aaPredicted RBP17.94■□□□□ 0.46
CCDC8-201ENST00000307522 CREG2Q8IUH2 290 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 MICAL1Q8TDZ2 1067 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
CCDC8-201ENST00000307522 YIPF3Q9GZM5 350 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 HAUS4Q9H6D7 363 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 EPB41L5Q9HCM4 733 aa17.94■□□□□ 0.46
CCDC8-201ENST00000307522 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 TARSL2A2RTX5 802 aaKnown RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 PHF20L1A8MW92 1017 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 BUB1O43683 1085 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 KIF4AO95239 1232 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 PTPREP23469 700 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 ERCC5P28715 1186 aaPredicted RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 PAPD7Q5XG87 772 aaKnown RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 MICALCLQ6ZW33 695 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 COL23A1Q86Y22 540 aaPredicted RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 TMEM87BQ96K49 555 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 A1CFQ9NQ94 594 aaKnown RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 MMP10P09238 476 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 ZNF483Q8TF39 744 aaPredicted RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 NSMCE1Q8WV22 266 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 BUB1BO60566 1050 aaPredicted RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 PPP1R7Q15435 360 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 ZNF174Q15697 407 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 ODF2Q5BJF6 829 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 C8orf74Q6P047 294 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 FAM167BQ9BTA0 163 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.93■□□□□ 0.46
CCDC8-201ENST00000307522 MYO1AQ9UBC5 1043 aa17.93■□□□□ 0.46
CCDC8-201ENST00000307522 B4DLN1 442 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 KRT86O43790 486 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 CHRNA5P30532 468 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 WLSQ5T9L3 541 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 FMNL3Q8IVF7 1028 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 TRIM22Q8IYM9 498 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 CTAGE1Q96RT6 745 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 LGR5O75473 907 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 TRIM21P19474 475 aaKnown RBP17.92■□□□□ 0.46
CCDC8-201ENST00000307522 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 THEMIS2Q5TEJ8 643 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 HAUS3Q68CZ6 603 aa17.92■□□□□ 0.46
CCDC8-201ENST00000307522 PACSIN2Q9UNF0 486 aaPredicted RBP17.92■□□□□ 0.46
CCDC8-201ENST00000307522 RTN2O75298 545 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 TCP10Q12799 353 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 RASSF8Q8NHQ8 419 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 CD209Q9NNX6 404 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 BTDP43251 543 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 TCP11X2Q5H9J9 407 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 NT5DC1Q5TFE4 455 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 CNNM2Q9H8M5 875 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 STIM2Q9P246 746 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 GNAT2P19087 354 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 MDH1P40925 334 aaKnown RBP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 SKOR1P84550 965 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 CRYMQ14894 314 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
CCDC8-201ENST00000307522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 NHEJ1Q9H9Q4 299 aaPredicted RBP17.91■□□□□ 0.46
CCDC8-201ENST00000307522 FAM237AA0A1B0GTK4 181 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 RBM5P52756 815 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 EPHB4P54760 987 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 HLTFQ14527 1009 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 SHROOM1Q2M3G4 852 aaPredicted RBP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 CATIPQ7Z7H3 387 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 CRACR2BQ8N4Y2 399 aaPredicted RBP17.9■□□□□ 0.46
CCDC8-201ENST00000307522 TBC1D22AQ8WUA7 517 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
CCDC8-201ENST00000307522 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.46
CCDC8-201ENST00000307522 LMBR1Q8WVP7 490 aa17.89■□□□□ 0.46
CCDC8-201ENST00000307522 CCDC51Q96ER9 411 aa17.89■□□□□ 0.46
CCDC8-201ENST00000307522 PLCD4Q9BRC7 762 aa17.89■□□□□ 0.46
CCDC8-201ENST00000307522 RNF41Q9H4P4 317 aaPredicted RBP17.89■□□□□ 0.46
CCDC8-201ENST00000307522 PPP1R1BQ9UD71 204 aaPredicted RBP17.89■□□□□ 0.46
CCDC8-201ENST00000307522 BTAF1O14981 1849 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 ZNF263O14978 683 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 HEXIM1O94992 359 aaKnown RBP17.89■□□□□ 0.45
CCDC8-201ENST00000307522 SCTRP47872 440 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 ALX1Q15699 326 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 DDX42Q86XP3 938 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCDC8-201ENST00000307522 KLHL7Q8IXQ5 586 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 LRRC4CQ9HCJ2 640 aa17.89■□□□□ 0.45
CCDC8-201ENST00000307522 CDKL5O76039 1030 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms