RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 ZKSCAN8Q15776 578 aaPredicted RBP20.19■□□□□ 0.82
ITGB5-201ENST00000296181 TRAPPC3LQ5T215 181 aa20.19■□□□□ 0.82
ITGB5-201ENST00000296181 VEZTQ9HBM0 779 aa20.19■□□□□ 0.82
ITGB5-201ENST00000296181 PTPN22Q9Y2R2 807 aa20.19■□□□□ 0.82
ITGB5-201ENST00000296181 PTPRUQ92729 1446 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 ZNF131P52739 623 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 FOXP4Q8IVH2 680 aaPredicted RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 MAGEF1Q9HAY2 307 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 ARHGEF35A5YM69 484 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 SASH3O75995 380 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 SUSD4Q5VX71 490 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 FBXW10Q5XX13 1052 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 TRIM68Q6AZZ1 485 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 CAPN12Q6ZSI9 719 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 CCDC197Q8NCU1 140 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 DDX12PQ92771 950 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 ARHGEF2Q92974 986 aaKnown RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 MAGOHBQ96A72 148 aaKnown RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 CCDC169A6NNP5 214 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 CFBP00751 764 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 MFSD14BQ5SR56 506 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 CPDO75976 1380 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 LAD1O00515 517 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 GUCY1A3Q02108 690 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 ACTN3Q08043 901 aaPredicted RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 PAXIP1Q6ZW49 1069 aaPredicted RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
ITGB5-201ENST00000296181 FAM212AQ96EL1 285 aa20.18■□□□□ 0.82
ITGB5-201ENST00000296181 SPATA31A3Q5VYP0 1347 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
ITGB5-201ENST00000296181 BACH1O14867 736 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 CLIC2O15247 247 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 TOM1O60784 492 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 FCER1AP12319 257 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 GCKP35557 465 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 TXNRD1Q16881 649 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 FAM133BQ5BKY9 247 aaKnown RBP20.17■□□□□ 0.82
ITGB5-201ENST00000296181 BANK1Q8NDB2 785 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 DAAM1Q9Y4D1 1078 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 BIRC3Q13489 604 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 PPP4R3AQ6IN85 833 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 RNF14Q9UBS8 474 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.17■□□□□ 0.82
ITGB5-201ENST00000296181 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 MYL1P05976 194 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 ZYXQ15942 572 aaKnown RBP20.17■□□□□ 0.82
ITGB5-201ENST00000296181 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
ITGB5-201ENST00000296181 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
ITGB5-201ENST00000296181 ALX1Q15699 326 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 L1RE1Q9UN81 338 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 BCRP11274 1271 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 DESP17661 470 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 ALKBH5Q6P6C2 394 aaKnown RBP20.16■□□□□ 0.82
ITGB5-201ENST00000296181 DPP8Q6V1X1 898 aaPredicted RBP20.16■□□□□ 0.82
ITGB5-201ENST00000296181 TMC4Q7Z404 712 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 FMNL3Q8IVF7 1028 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 WHAMMQ8TF30 809 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 LIMA1Q9UHB6 759 aaKnown RBP20.16■□□□□ 0.82
ITGB5-201ENST00000296181 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 MEIS1O00470 390 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 ATP2C1P98194 919 aaPredicted RBP20.16■□□□□ 0.82
ITGB5-201ENST00000296181 DPYDQ12882 1025 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 MESDQ14696 234 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 MECOMQ03112 1051 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 CROCCP2Q86T23 111 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 RIC8AQ9NPQ8 531 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■□ 21.7
ITGB5-201ENST00000296181 CAPN11Q9UMQ6 739 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 CEP83Q9Y592 693 aa20.16■□□□□ 0.82
ITGB5-201ENST00000296181 UTYO14607 1347 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
ITGB5-201ENST00000296181 MYOM1P52179 1685 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 POTEMA6NI47 508 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 LRRN2O75325 713 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 GFPT2O94808 682 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 SERPING1P05155 500 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 SLC16A2P36021 539 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 HPSEQ9Y251 543 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
ITGB5-201ENST00000296181 ADGRL3Q9HAR2 1447 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 CD44P16070 742 aaKnown RBP20.15■□□□□ 0.82
ITGB5-201ENST00000296181 PFKFB3Q16875 520 aaPredicted RBP20.15■□□□□ 0.82
ITGB5-201ENST00000296181 CCNI2Q6ZMN8 369 aaPredicted RBP20.15■□□□□ 0.82
ITGB5-201ENST00000296181 KDM3AQ9Y4C1 1321 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 PRDX5P30044 214 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 MS4A14Q96JA4 679 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 KLHL14Q9P2G3 628 aa20.15■□□□□ 0.82
ITGB5-201ENST00000296181 CCDC160A6NGH7 325 aa20.14■□□□□ 0.82
ITGB5-201ENST00000296181 KRT14P02533 472 aa20.14■□□□□ 0.82
ITGB5-201ENST00000296181 HARSP12081 509 aaKnown RBP20.14■□□□□ 0.82
ITGB5-201ENST00000296181 SLC8A1P32418 973 aa20.14■□□□□ 0.82
ITGB5-201ENST00000296181 BTDP43251 543 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms