RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CTNND1O60716 968 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 TNFAIP3P21580 790 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 ASIC2Q16515 512 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 CCDC14Q49A88 953 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 DCAF17Q5H9S7 520 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 BAIAP2L1Q9UHR4 511 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 CEP104O60308 925 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 GTF2A2P52657 109 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 GAS2L3Q86XJ1 694 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
SYNGAP1-201ENST00000293748 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 E7EVH7 732 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 SH3BGRP55822 239 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 WDR90Q96KV7 1748 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 VGLL3A8MV65 326 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 GOLGA8KD6RF30 607 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 CETPP11597 493 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 NFIAQ12857 509 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 IFNL3Q8IZI9 196 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 FRMD4BQ9Y2L6 1034 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 SCN4AP35499 1836 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 EGFRP00533 1210 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 RASSF2P50749 326 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 CCDC62Q6P9F0 684 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 LRRC8AQ8IWT6 810 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 PLIN2Q99541 437 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 CAPN7Q9Y6W3 813 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 FAM169AQ9Y6X4 670 aa13.04□□□□□ -0.32
SYNGAP1-201ENST00000293748 CLGNO14967 610 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 GNGT1P63211 74 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 SCYL3Q8IZE3 742 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 NDC80O14777 642 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 OSBPP22059 807 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 TPD52P55327 224 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 LRMPQ12912 555 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 KIFAP3Q92845 792 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 ARHGEF2Q92974 986 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 DCP1AQ9NPI6 582 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 RNF40O75150 1001 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 FLOT1O75955 427 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 KRT40Q6A162 431 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 CA12O43570 354 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 SLC8A1P32418 973 aa13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-201ENST00000293748 B4E1Z4 1266 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 APBA1Q02410 837 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 PPP2R5EQ16537 467 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 LETM2Q2VYF4 491 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 OSBP2Q969R2 916 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 FAM227BQ96M60 508 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 TCHPQ9BT92 498 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 EHD4Q9H223 541 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 ZHX2Q9Y6X8 837 aa13.02□□□□□ -0.32
SYNGAP1-201ENST00000293748 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 KLHL7Q8IXQ5 586 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 RNF10Q8N5U6 811 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 RAB17Q9H0T7 212 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 HAUS4Q9H6D7 363 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 PPARAQ07869 468 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 TMEM179Q6ZVK1 233 aa13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-201ENST00000293748 PARP2Q9UGN5 583 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms