RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ADAM9Q13443 819 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 LRRC41Q15345 812 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ZSCAN26Q16670 478 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 TUBB8Q3ZCM7 444 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
HMGCR-201ENST00000287936 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ARMCX3Q9UH62 379 aaPredicted RBP11.09□□□□□ -0.63
HMGCR-201ENST00000287936 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
HMGCR-201ENST00000287936 DAGLAQ9Y4D2 1042 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ANKRD36CQ5JPF3 1778 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 PDHBP11177 359 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 POLR2FP61218 127 aaKnown RBP11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ICA1Q05084 483 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 SND1Q7KZF4 910 aaKnown RBP eCLIP11.09□□□□□ -0.635e-7■■■□□ 18.7
HMGCR-201ENST00000287936 GOLGA5Q8TBA6 731 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 TBC1D16Q8TBP0 767 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
HMGCR-201ENST00000287936 ABCB11O95342 1321 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 FLOT1O75955 427 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 TDP2O95551 362 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 PLA2G4BP0C869 781 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 KRT13P13646 458 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 USP14P54578 494 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 PAK2Q13177 524 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 FIGNQ5HY92 759 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 KCTD1Q719H9 257 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 SP8Q8IXZ3 490 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 NLGN1Q8N2Q7 840 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 MSANTD4Q8NCY6 345 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
HMGCR-201ENST00000287936 SERPING1P05155 500 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 AKR1B1P15121 316 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 ERCC3P19447 782 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 DOK7Q18PE1 504 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 PRR16Q569H4 304 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 CFAP58Q5T655 872 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
HMGCR-201ENST00000287936 TBC1D8O95759 1140 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
HMGCR-201ENST00000287936 SLC16A2P36021 539 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 TCP10Q12799 353 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 COASYQ13057 564 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 PPFIA1Q13136 1202 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 ANO3Q9BYT9 981 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 CENPHQ9H3R5 247 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 CEP72Q9P209 647 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-201ENST00000287936 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 GOLGA6CA6NDK9 693 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 WNT7AO00755 349 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 GOLGA6DP0CG33 693 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 RAD51AP2Q09MP3 1159 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 GOLGA6AQ9NYA3 693 aa11.08□□□□□ -0.64
HMGCR-201ENST00000287936 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 SH2D4AQ9H788 454 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
HMGCR-201ENST00000287936 TOGARAM1Q9Y4F4 1720 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 ZRANB2O95218 330 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCR-201ENST00000287936 ATP1A1P05023 1023 aaKnown RBP11.07□□□□□ -0.64
HMGCR-201ENST00000287936 IL1R1P14778 569 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 NPR1P16066 1061 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 CDK17Q00537 523 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 RASSF7Q02833 373 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 NPY5RQ15761 445 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 IL17AQ16552 155 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 MAATS1Q7Z4T9 603 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 GOLGA6L10A0A0M3HER8 536 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 MYMKA6NI61 221 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 MOCS3O95396 460 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 CYP2C19P33261 490 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 RPS6KA1Q15418 735 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 SKIDA1Q1XH10 827 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 USH1GQ495M9 461 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 C4orf32Q8N8J7 132 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 ST7Q9NRC1 585 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 AGPAT5Q9NUQ2 364 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 FRMD4BQ9Y2L6 1034 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 FAN1Q9Y2M0 1017 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 LRP5O75197 1615 aa11.07□□□□□ -0.64
HMGCR-201ENST00000287936 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 GCNT3O95395 438 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 VSNL1P62760 191 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
HMGCR-201ENST00000287936 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
HMGCR-201ENST00000287936 SMCR8Q8TEV9 937 aaPredicted RBP11.06□□□□□ -0.64
HMGCR-201ENST00000287936 RUBCNQ92622 972 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms