RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MYMKA6NI61 221 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 C6orf229H3BNL8 230 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 SLC37A4O43826 429 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 TRIM21P19474 475 aaKnown RBP27.91■■■□□ 2.06
ROM1-201ENST00000278833 TXKP42681 527 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 GTF2IP78347 998 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 ZNF771Q7L3S4 317 aaPredicted RBP27.91■■■□□ 2.06
ROM1-201ENST00000278833 GBP3Q9H0R5 595 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 JMJD4Q9H9V9 463 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 SIPA1L1O43166 1804 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 ANO9A1A5B4 782 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 ERLIN1O75477 346 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 HHIPL2Q6UWX4 724 aa27.91■■■□□ 2.06
ROM1-201ENST00000278833 DPP8Q6V1X1 898 aaPredicted RBP27.91■■■□□ 2.06
ROM1-201ENST00000278833 MYH7BA7E2Y1 1941 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 KRT86O43790 486 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 SHMT1P34896 483 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 TTLL6Q8N841 843 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 RPGRIP1Q96KN7 1286 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 DDX4Q9NQI0 724 aaKnown RBP27.9■■■□□ 2.06
ROM1-201ENST00000278833 ST7Q9NRC1 585 aa27.9■■■□□ 2.06
ROM1-201ENST00000278833 PUF60Q9UHX1 559 aaKnown RBP27.9■■■□□ 2.06
ROM1-201ENST00000278833 TDP2O95551 362 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 MAN2A1Q16706 1144 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 BEND6Q5SZJ8 279 aaPredicted RBP27.89■■■□□ 2.06
ROM1-201ENST00000278833 KRT79Q5XKE5 535 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 LRRC47Q8N1G4 583 aaKnown RBP27.89■■■□□ 2.06
ROM1-201ENST00000278833 COA7Q96BR5 231 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 CDK5RAP3Q96JB5 506 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 EDEM3Q9BZQ6 932 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 TSGA10Q9BZW7 698 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 SIK3Q9Y2K2 1263 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 ADAMTSL1Q8N6G6 1762 aa27.89■■■□□ 2.06
ROM1-201ENST00000278833 MCM6Q14566 821 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 CUL5Q93034 780 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 CNKSR1Q969H4 720 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 CCDC17Q96LX7 622 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 AGPAT5Q9NUQ2 364 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 BCS1LQ9Y276 419 aa27.89■■■□□ 2.05
ROM1-201ENST00000278833 VWA3BQ502W6 1294 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 DALRD3Q5D0E6 543 aaKnown RBP27.88■■■□□ 2.05
ROM1-201ENST00000278833 WDR93Q6P2C0 686 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 ADGRF4Q8IZF3 695 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 CERS5Q8N5B7 392 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 JAKMIP2Q96AA8 810 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 NHEJ1Q9H9Q4 299 aaPredicted RBP27.88■■■□□ 2.05
ROM1-201ENST00000278833 ATAD5Q96QE3 1844 aa27.88■■■□□ 2.05
ROM1-201ENST00000278833 KDM3AQ9Y4C1 1321 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 PES1O00541 588 aaKnown RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 ALDH1B1P30837 517 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 MRPL12P52815 198 aaKnown RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 PLAGL2Q9UPG8 496 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 ZNF646O15015 1829 aaPredicted RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 ZBTB5O15062 677 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 IPO7O95373 1038 aaKnown RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 LCA5LO95447 670 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 SMC1AQ14683 1233 aaKnown RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 CCDC122Q5T0U0 273 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 LRRC55Q6ZSA7 311 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 CCDC84Q86UT8 332 aaPredicted RBP27.87■■■□□ 2.05
ROM1-201ENST00000278833 SNX29Q8TEQ0 813 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 PNKPQ96T60 521 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 GUCA1BQ9UMX6 200 aa27.87■■■□□ 2.05
ROM1-201ENST00000278833 PPP1R11O60927 126 aaPredicted RBP27.86■■■□□ 2.05
ROM1-201ENST00000278833 YBX3P16989 372 aaKnown RBP eCLIP27.86■■■□□ 2.05
ROM1-201ENST00000278833 VAV2P52735 878 aa27.86■■■□□ 2.05
ROM1-201ENST00000278833 SLX4Q8IY92 1834 aa27.86■■■□□ 2.05
ROM1-201ENST00000278833 HLA-DOAP06340 250 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 CKAP4Q07065 602 aaKnown RBP27.85■■■□□ 2.05
ROM1-201ENST00000278833 PICALMQ13492 652 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 KIAA1328Q86T90 577 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 SLC39A2Q9NP94 309 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 ZHX1Q9UKY1 873 aaPredicted RBP27.85■■■□□ 2.05
ROM1-201ENST00000278833 CYP2C19P33261 490 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 MOXD1Q6UVY6 613 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 HDXQ7Z353 690 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 MBOAT7Q96N66 472 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 MRIQ9BWK5 157 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 NT5C3AQ9H0P0 336 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 NDST4Q9H3R1 872 aa27.85■■■□□ 2.05
ROM1-201ENST00000278833 GPR162Q16538 588 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 ZCWPW2Q504Y3 356 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 HAS1Q92839 578 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 ZSWIM4Q9H7M6 989 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 GPCPD1Q9NPB8 672 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 USP40Q9NVE5 1235 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 TRIM10Q9UDY6 481 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 DDX25Q9UHL0 483 aaKnown RBP27.84■■■□□ 2.05
ROM1-201ENST00000278833 L1RE1Q9UN81 338 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 SAR1BQ9Y6B6 198 aa27.84■■■□□ 2.05
ROM1-201ENST00000278833 POTEMA6NI47 508 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 MCM3P25205 808 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 OAS2P29728 719 aaKnown RBP27.83■■■□□ 2.05
ROM1-201ENST00000278833 TNNI2P48788 182 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 KLK7P49862 253 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 FKBP1AP62942 108 aaKnown RBP27.83■■■□□ 2.05
ROM1-201ENST00000278833 TAF3Q5VWG9 929 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 MCTP2Q6DN12 878 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 MKL1Q969V6 931 aa27.83■■■□□ 2.05
ROM1-201ENST00000278833 TSG101Q99816 390 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms