RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 TRIM37O94972 964 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 KITP10721 976 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 ZYXQ15942 572 aaKnown RBP12.06□□□□□ -0.48
CHFR-201ENST00000266880 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 H2AFZP0C0S5 128 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 SERPINB10P48595 397 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 H2AFVQ71UI9 128 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
CHFR-201ENST00000266880 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
CHFR-201ENST00000266880 GSDMAQ96QA5 445 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 NSFP46459 744 aaKnown RBP12.06□□□□□ -0.48
CHFR-201ENST00000266880 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 MYOCDQ8IZQ8 938 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 ZBTB18Q99592 522 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 TMEM60Q9H2L4 133 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 SYNDIG1LA6NDD5 238 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 MYL7Q01449 175 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 ASZ1Q8WWH4 475 aa12.06□□□□□ -0.48
CHFR-201ENST00000266880 A0A1B0GW55 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 WDR47O94967 919 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L2P0CJ85 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L3P0CJ86 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L4P0CJ87 422 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L5P0CJ88 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L6P0CJ89 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4L7P0CJ90 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 GRK2P25098 689 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 CDC25BP30305 580 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 COPB1P53618 953 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 TEX9Q8N6V9 391 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 ALKBH8Q96BT7 664 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 CUL3Q13618 768 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 C10orf76Q5T2E6 689 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 KLC3Q6P597 504 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 FAM47EQ6ZV65 393 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 OR9Q1Q8NGQ5 310 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 MLXIPLQ9NP71 852 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 ITSN2Q9NZM3 1697 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 NONOQ15233 471 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHFR-201ENST00000266880 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 L3MBTL1Q9Y468 752 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 PRDM1O75626 825 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 GSPT1P15170 499 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 CYTH1Q15438 398 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 ARHGAP26Q9UNA1 814 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 PGRMC1O00264 195 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 KCNA1Q09470 495 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 PLD3Q8IV08 490 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 AP1M1Q9BXS5 423 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 TMOD1P28289 359 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 SLC30A9Q6PML9 568 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 FAM43BQ6ZT52 329 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 TMEM87BQ96K49 555 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 TEX13AQ9BXU3 409 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 AP2B1P63010 937 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 SLC39A6Q13433 755 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 PANK4Q9NVE7 773 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 DNM2P50570 870 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 C6orf203Q9P0P8 240 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 PJA2O43164 708 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 MMEP08473 750 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 CASP14P31944 242 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 TBC1D10BQ4KMP7 808 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 BEND6Q5SZJ8 279 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 NAF1Q96HR8 494 aaKnown RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 SH3GL1Q99961 368 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
CHFR-201ENST00000266880 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
CHFR-201ENST00000266880 KRT1P04264 644 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 TBC1D23Q9NUY8 699 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 FTCDO95954 541 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 ZSCAN9O15535 394 aaPredicted RBP12.04□□□□□ -0.48
CHFR-201ENST00000266880 BBS9Q3SYG4 887 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
CHFR-201ENST00000266880 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 SLC39A2Q9NP94 309 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 STMN3Q9NZ72 180 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 GAS7O60861 476 aa12.04□□□□□ -0.48
CHFR-201ENST00000266880 DCTN3O75935 186 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms