RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CARSP49589 748 aaKnown RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 ATP2C1P98194 919 aaPredicted RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 PAK2Q13177 524 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 ARMT1Q9H993 441 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 NHEJ1Q9H9Q4 299 aaPredicted RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 SMARCAL1Q9NZC9 954 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 C15orf41Q9Y2V0 281 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 GOLGA6L10A6NI86 522 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 H7C1D1 291 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 TCP1P17987 556 aaKnown RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 PAFAH1B1P43034 410 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 MEA1Q16626 185 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 HIBCHQ6NVY1 386 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 KRT27Q7Z3Y8 459 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 SMCR8Q8TEV9 937 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 IFT81Q8WYA0 676 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 ITFG2Q969R8 447 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 NUP58Q9BVL2 599 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 GDF3Q9NR23 364 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 HYOU1Q9Y4L1 999 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 SLC4A4Q9Y6R1 1079 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 PES1O00541 588 aaKnown RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 IRS4O14654 1257 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 GHRP10912 638 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 PECAM1P16284 738 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 CXCR5P32302 372 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 GUCY2FP51841 1108 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 KCNQ4P56696 695 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 CYP27A1Q02318 531 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 PPP1R7Q15435 360 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 TTC38Q5R3I4 469 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 NFRKBQ6P4R8 1299 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 CRELD2Q6UXH1 353 aaPredicted RBP14.48□□□□□ -0.09
NUP54-201ENST00000264883 CCDC170Q8IYT3 715 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 SYNE4Q8N205 404 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 NUP133Q8WUM0 1156 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 KDM4CQ9H3R0 1056 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 EHD2Q9NZN4 543 aa14.48□□□□□ -0.09
NUP54-201ENST00000264883 ANP32DO95626 131 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 TRAF1Q13077 416 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 BYSLQ13895 437 aaKnown RBP14.47□□□□□ -0.09
NUP54-201ENST00000264883 SEC23AQ15436 765 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 MIS18BP1Q6P0N0 1132 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 NELFBQ8WX92 580 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 CCT6BQ92526 530 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 PSMB7Q99436 277 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 TMBIM4Q9HC24 238 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 EPB41L5Q9HCM4 733 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 RBM12Q9NTZ6 932 aaKnown RBP14.47□□□□□ -0.09
NUP54-201ENST00000264883 TACC3Q9Y6A5 838 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 EP400Q96L91 3159 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 C5orf60A6NFR6 353 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 SMNDC1O75940 238 aaKnown RBP eCLIP14.47□□□□□ -0.09
NUP54-201ENST00000264883 MYL1P05976 194 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 GLI1P08151 1106 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 EEF1GP26641 437 aaKnown RBP14.47□□□□□ -0.09
NUP54-201ENST00000264883 SLMAPQ14BN4 828 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 CCDC96Q2M329 555 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 POTEAQ6S8J7 498 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.09
NUP54-201ENST00000264883 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 CATIPQ7Z7H3 387 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
NUP54-201ENST00000264883 VPS54Q9P1Q0 977 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 PLAAQ9Y263 795 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 CAPN6Q9Y6Q1 641 aa14.47□□□□□ -0.09
NUP54-201ENST00000264883 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 USO1O60763 962 aaKnown RBP14.46□□□□□ -0.09
NUP54-201ENST00000264883 DDAH1O94760 285 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 PARP1P09874 1014 aaKnown RBP14.46□□□□□ -0.09
NUP54-201ENST00000264883 PPARDQ03181 441 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 PKN1Q16512 942 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 GKAP1Q5VSY0 366 aaPredicted RBP14.46□□□□□ -0.09
NUP54-201ENST00000264883 ARL6IP4Q66PJ3 421 aaKnown RBP14.46□□□□□ -0.09
NUP54-201ENST00000264883 STAMQ92783 540 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 IQCDQ96DY2 449 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 INCENPQ9NQS7 918 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.46□□□□□ -0.09
NUP54-201ENST00000264883 TNKSO95271 1327 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 XDHP47989 1333 aa14.46□□□□□ -0.09
NUP54-201ENST00000264883 SCN7AQ01118 1682 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 MYH2Q9UKX2 1941 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 ESYT3A0FGR9 886 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 RGL2O15211 777 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 HEXIM1O94992 359 aaKnown RBP14.46□□□□□ -0.1
NUP54-201ENST00000264883 GUCY2DQ02846 1103 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 RASGRF1Q13972 1273 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 SPA17Q15506 151 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 PDXDC2PQ6P474 469 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 FAM196AQ6ZSG2 479 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms