RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 GRAMD4Q6IC98 578 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 EFHD1Q9BUP0 239 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 POLR2MP0CAP2 368 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 HSPD1P10809 573 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 PLS3P13797 630 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 PMLP29590 882 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 PTK2Q05397 1052 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 C10orf76Q5T2E6 689 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 STK32BQ9NY57 414 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 SRGAP2BP0DMP2 458 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 TAGAPQ8N103 731 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 KIAA1024Q9UPX6 916 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 RFX8Q6ZV50 586 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 TRAIPQ9BWF2 469 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 AP1M1Q9BXS5 423 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 FAM95CA0A1B0GW59 222 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 INO80B-WBP1J3KQ70 363 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZNF18P17022 549 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 LRRC8AQ8IWT6 810 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 GPT2Q8TD30 523 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 INO80BQ9C086 356 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZCWPW1Q9H0M4 648 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 MEIS1O00470 390 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 PDHA1P08559 390 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 SNX19Q92543 992 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 FAM8A1Q9UBU6 413 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ERFP50548 548 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 BBS9Q3SYG4 887 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 KIAA1841Q6NSI8 718 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 HSPH1Q92598 858 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 SYMPKQ92797 1274 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 SNX25Q9H3E2 840 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 NOVA2Q9UNW9 492 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ESRRAP11474 423 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 NDUFA8P51970 172 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 EYA1Q99502 592 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 YY1AP1Q9H869 796 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 HIBCHQ6NVY1 386 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 BBS5Q8N3I7 341 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-201ENST00000262215 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 PDCD6IPQ8WUM4 868 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 TEKT3Q9BXF9 490 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 GYS2P54840 703 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 TESK2Q96S53 571 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 A0A0G2JND7 137 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 MCF2LO15068 1137 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 MCF2P10911 925 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 RWDD4Q6NW29 188 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 GFPT2O94808 682 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 GYG1P46976 350 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
ARFGEF1-201ENST00000262215 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
ARFGEF1-201ENST00000262215 MAN1A2O60476 641 aa13.46□□□□□ -0.25
ARFGEF1-201ENST00000262215 TADA3O75528 432 aa13.46□□□□□ -0.25
ARFGEF1-201ENST00000262215 GUCY2CP25092 1073 aa13.46□□□□□ -0.25
ARFGEF1-201ENST00000262215 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms