RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 TULP2O00295 520 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 TACC1O75410 805 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
DDX56-201ENST00000258772 EIF4A3P38919 411 aaKnown RBP16.92■□□□□ 0.3
DDX56-201ENST00000258772 AARSP49588 968 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX56-201ENST00000258772 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
DDX56-201ENST00000258772 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 LRRC27Q9C0I9 530 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 SNX12Q9UMY4 172 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 ZMYND10O75800 440 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 GABPAQ06546 454 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 TMEM119Q4V9L6 283 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
DDX56-201ENST00000258772 FAM196AQ6ZSG2 479 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 RRAGAQ7L523 313 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 CREG2Q8IUH2 290 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 GPCPD1Q9NPB8 672 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 HPCAL4Q9UM19 191 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 CAPN6Q9Y6Q1 641 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 LRRC53A6NM62 1247 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 SYF2O95926 243 aaKnown RBP16.91■□□□□ 0.3
DDX56-201ENST00000258772 PRLRP16471 622 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 CAPN2P17655 700 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
DDX56-201ENST00000258772 LRRC41Q15345 812 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 PPP4R3AQ6IN85 833 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 BAP1Q92560 729 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
DDX56-201ENST00000258772 PNMA6FA0A0J9YX94 578 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 AKR1B10O60218 316 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 AKR1B1P15121 316 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 TNNI2P48788 182 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
DDX56-201ENST00000258772 C2orf54Q08AI8 447 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 ECM1Q16610 540 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 FOXR2Q6PJQ5 311 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 GLIS3Q8NEA6 775 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 JMJD4Q9H9V9 463 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 MOCS3O95396 460 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 PICALMQ13492 652 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 MMGT1Q8N4V1 131 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
DDX56-201ENST00000258772 TSG101Q99816 390 aa16.9■□□□□ 0.3
DDX56-201ENST00000258772 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
DDX56-201ENST00000258772 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 MYH7BA7E2Y1 1941 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
DDX56-201ENST00000258772 MYBL2P10244 700 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 ERCC3P19447 782 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 MAGEA1P43355 309 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 CLK2P49760 499 aaKnown RBP16.89■□□□□ 0.29
DDX56-201ENST00000258772 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 UBE2SQ16763 222 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
DDX56-201ENST00000258772 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 ZNF572Q7Z3I7 529 aaPredicted RBP16.89■□□□□ 0.29
DDX56-201ENST00000258772 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 PROM2Q8N271 834 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 HAS1Q92839 578 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 DNAJC19Q96DA6 116 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 EDEM3Q9BZQ6 932 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 LY75O60449 1722 aa16.89■□□□□ 0.29
DDX56-201ENST00000258772 RNF40O75150 1001 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 BBOX1O75936 387 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 ITIH3Q06033 890 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 KCNMA1Q12791 1236 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
DDX56-201ENST00000258772 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 GDAP1L1Q96MZ0 367 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 FAM204AQ9H8W3 233 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
DDX56-201ENST00000258772 PJA2O43164 708 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 PPP1R11O60927 126 aaPredicted RBP16.88■□□□□ 0.29
DDX56-201ENST00000258772 PRPF6O94906 941 aaKnown RBP16.88■□□□□ 0.29
DDX56-201ENST00000258772 TTLL1O95922 423 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
DDX56-201ENST00000258772 COASYQ13057 564 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 CCDC70Q6NSX1 233 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms