RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 SMCO2A6NFE2 343 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 AFPP02771 609 aaKnown RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 TCP11X2Q5H9J9 407 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 DACT3Q96B18 629 aaPredicted RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 POC1B-GALNT4F8VUJ3 575 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 LRRC43Q8N309 656 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 EYA3Q99504 573 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 KRT37O76014 449 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 PICALMQ13492 652 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 RAB44Q7Z6P3 723 aaPredicted RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 USP6NLQ92738 828 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 PTPRTO14522 1441 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 CTIFO43310 598 aaKnown RBP8.9□□□□□ -0.99
APOB-201ENST00000233242 GCFC2P16383 781 aaKnown RBP8.9□□□□□ -0.99
APOB-201ENST00000233242 TMED2Q15363 201 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 FAM178BQ8IXR5 827 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 EPN3Q9H201 632 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 CRLF3Q8IUI8 442 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 ZFP69BQ9UJL9 534 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 SRGAP2BP0DMP2 458 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 USP14P54578 494 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 OTUD6AQ7L8S5 288 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 ZNF579Q8NAF0 562 aaKnown RBP8.9□□□□□ -0.99
APOB-201ENST00000233242 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 KIF21AQ7Z4S6 1674 aa8.9□□□□□ -0.99
APOB-201ENST00000233242 SERPINB4P48594 390 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 ARL6IP4Q66PJ3 421 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 A2MP01023 1474 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 BTBD18B2RXH4 712 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 PDE8AO60658 829 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 NOP14P78316 857 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 KIF23Q02241 960 aaPredicted RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 RESTQ13127 1097 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CA4P22748 312 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 PDIK1LQ8N165 341 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 NUDCD1Q96RS6 583 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 USP40Q9NVE5 1235 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 LOC102724159A0A0B4J2E5 919 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 GAS7O60861 476 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 TNNI1P19237 187 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CCNE1P24864 410 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 PWP2Q15269 919 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 EEF1B2P24534 225 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 CENPUQ71F23 418 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CLIC6Q96NY7 704 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 MAST1Q9Y2H9 1570 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 PTK2Q05397 1052 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 KRT31Q15323 416 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 MRPL47Q9HD33 250 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 LAMC3Q9Y6N6 1575 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 LGALS16A8MUM7 142 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 NEK2P51955 445 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 ELAC2Q9BQ52 826 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 MAD1L1Q9Y6D9 718 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 UHRF1BP1LA0JNW5 1464 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 FBLN1P23142 703 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 CYP2J2P51589 502 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 MRPS35P82673 323 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 C1orf146Q5VVC0 180 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 OSBPL1AQ9BXW6 950 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 ZBTB21Q9ULJ3 1066 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 HIBADHP31937 336 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 ADGRL2O95490 1459 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
APOB-201ENST00000233242 HOXC9P31274 260 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 MYL7Q01449 175 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 TEX2Q8IWB9 1127 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 SLITRK6Q9H5Y7 841 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 SLC39A2Q9NP94 309 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 IRAK4Q9NWZ3 460 aa8.89□□□□□ -0.99
APOB-201ENST00000233242 MCF2LO15068 1137 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 SESTD1Q86VW0 696 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 IL2RBP14784 551 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 UBE3CQ15386 1083 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 ANKRD13CQ8N6S4 541 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 TTC16Q8NEE8 873 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 LARP4BQ92615 738 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 PCDHA12Q9UN75 941 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 ADD1P35611 737 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 SENP1Q9P0U3 644 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 PPP1R12AO14974 1030 aaPredicted RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 MOCS3O95396 460 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 CCND1P24385 295 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 BSPRYQ5W0U4 402 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 LRIG3Q6UXM1 1119 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 CPP00450 1065 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms