RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Kcnk18Q6VV64 394 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Tmem132dQ76HP3 1097 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Nim1kQ8BHI9 436 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Snx17Q8BVL3 470 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Fam155aQ8CCS2 467 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 PdgfcQ8CI19 345 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Rbp7Q9EPC5 134 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Col4a3bpQ9EQG9 624 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Dhx15O35286 795 aaKnown RBP21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Clul1Q3ZRW6 464 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Usp28Q5I043 1051 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Kif5bQ61768 963 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Cdc14aQ6GQT0 603 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 ShbQ6PD21 503 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gga3Q8BMI3 718 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Nek9Q8K1R7 984 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Trim11Q99PQ2 467 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Saal1Q9D2C2 474 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Adgrf4Q9D2L6 698 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 FibpQ9JI19 357 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Krt85Q9Z2T6 507 aa21.24■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Barx2O08686 283 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Atp9aO70228 1047 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Cntnap5bQ0V8T8 1292 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Rnf207Q3V3A7 635 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Srrm1Q52KI8 946 aaKnown RBP21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Ddx4Q61496 702 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Rnf208Q8K0W3 265 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Hdhd5Q91WM2 419 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Mmtag2Q99LX5 260 aaKnown RBP21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Ggps1Q9WTN0 300 aa21.23■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gm44511A0A0N4SW10 223 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gm13128L7MU96 475 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Esr2O08537 530 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Klrb1bP27812 223 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Rit2P70425 217 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Sptlc2P97363 560 aaKnown RBP21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Osbpl2Q8BX94 484 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 CnstQ8CBC4 711 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Ddx41Q91VN6 622 aaKnown RBP21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Coa7Q921H9 231 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Mipol1Q9D9F8 279 aa21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 PfkpQ9WUA3 784 aaKnown RBP21.22■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Plxnb3Q9QY40 1902 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Pramel3A2AHA7 463 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gm7903A2AWL1 463 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 AV320801A2AWL3 467 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Mroh8E9PYI4 1049 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 TazI7HJS2 263 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gm15023L7MUB4 467 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Timm44O35857 452 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Prom1O54990 867 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Irs1P35569 1233 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Tff2Q03404 129 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 IqcgQ80W32 419 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Usp6nlQ80XC3 819 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Mettl5Q8K1A0 209 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Plekha4Q8VC98 588 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Stk38Q91VJ4 465 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Krt23Q99PS0 422 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Fkbp1bQ9Z2I2 108 aa21.21■□□□□ 0.99
Scn1b-203ENSMUST00000211945 Gm15262A0A140LIQ5 728 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Ccdc112A0AUP1 442 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Nr5a1P33242 462 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Cd22P35329 862 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Cyp2c39P56656 490 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Lrrfip1Q3UZ39 729 aaKnown RBP21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Itgbl1Q8VDV0 494 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Igbp1bQ9QZ29 343 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 SktA2AQ25 1946 aaKnown RBP21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Trip11E9Q512 1976 aa21.2■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Ccdc78D3Z5T1 437 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Lpar1P61793 364 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 StamP70297 548 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 KhsrpQ3U0V1 748 aaKnown RBP21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Lrrc14bQ3UJB3 510 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 C87499Q3UX49 493 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Fam189a2Q4FZH1 290 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Nlrp2Q4PLS0 1046 aaKnown RBP21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Tbc1d22bQ80VE5 505 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Col26a1Q91VF6 440 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Antxr1Q9CZ52 562 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Pidd1Q9ERV7 915 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Msgn1Q9JK54 188 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Cntn6Q9JMB8 1028 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Fxr2Q9WVR4 673 aaKnown RBP21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Mia3Q8BI84 1930 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Nfx1B1AY10 1114 aaKnown RBP21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Gm5134E9QAB5 671 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 EdnrbP48302 442 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Grm1P97772 1199 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Ly9Q01965 654 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Gtf2f1Q3THK3 508 aaKnown RBP21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Lrrc36Q3V0M2 755 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Bbs9Q811G0 885 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Arhgef19Q8BWA8 802 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Atp2a1Q8R429 994 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Cep72Q9D3R3 646 aa21.19■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Ms4a4aA0A087WRT7 236 aa21.18■□□□□ 0.98
Scn1b-203ENSMUST00000211945 Gm3095E9Q058 166 aa21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms