RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 NumbQ9QZS3 653 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Kif6E9PX57 802 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Apol11aE9PZG0 334 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Cfap73J3QPZ5 306 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Prkar2bP31324 416 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 PrkczQ02956 592 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 AY358078Q6UY53 465 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ipo4Q8VI75 1082 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Prl3d3A0A0M6L0J6 224 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 InaP46660 501 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Tmco4Q91WU4 631 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Mcrs1Q99L90 462 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 CacybpQ9CXW3 229 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Q9D937 123 aaKnown RBP11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Kif14L0N7N1 1674 aaKnown RBP11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Naaladl2A0A0N4SUJ3 795 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Klrk1O54709 232 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 PtgdrP70263 357 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Mief2Q5NCS9 454 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Scarf1Q5ND28 820 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ccdc169Q8BXX9 214 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ubxn4Q8VCH8 506 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Senp2Q91ZX6 588 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 NamptQ99KQ4 491 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 GakQ99KY4 1305 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Zbtb7aO88939 569 aaKnown RBP11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 MlxipQ2VPU4 917 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Arhgef2Q60875 985 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Zfyve28Q6ZPK7 905 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Tmc4Q7TQ65 694 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Mxd3Q80US8 206 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 MyripQ8K3I4 856 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Brms1Q99N20 246 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 StambpQ9CQ26 424 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ccdc105Q9D4K7 499 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Myl7Q9QVP4 175 aa11.13□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Glra4Q61603 456 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Spaca7Q9D2S4 182 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ncoa3O09000 1398 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ahdc1Q6PAL7 1594 aaKnown RBP11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Grap2O89100 322 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gas2l3Q3UWW6 683 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Senp5Q6NXL6 749 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Stat5bP42232 786 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Mcm5P49718 733 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 GypcQ78HU7 95 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 MafaQ8CF90 359 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 BbxQ8VBW5 907 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Capns2Q9D7J7 247 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Poc5Q9DBS8 558 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Nr5a1P33242 462 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Sdc2P43407 202 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Krt39Q6IFX4 482 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 RimklbQ80WS1 387 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Dhx38Q80X98 1228 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ccdc77Q9CZH8 489 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gm5592Q3V0A6 857 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Fscn1Q61553 493 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Smarca1Q6PGB8 1046 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Acnat2Q8BGG9 420 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Depdc1bQ8BH88 529 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Arhgap18Q8K0Q5 663 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Plekhg6Q8R0J1 787 aa11.12□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Cyp21P03940 487 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gfpt1P47856 697 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Trmt10cQ3UFY8 414 aaKnown RBP11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Cnga2Q62398 664 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gprasp2Q8BUY8 826 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Spata1Q9D5R4 444 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 2010005H15RikQ9D8D6 97 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ms4a4aA0A087WRT7 236 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Serpina3kP07759 418 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Plbd2Q3TCN2 594 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Trappc10Q3TLI0 1259 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Snx30Q8CE50 437 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ppp4r1Q8K2V1 951 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Sept2P42208 361 aaKnown RBP11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Srbd1Q497V5 1015 aaKnown RBP11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Asap3Q5U464 904 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Apol9bQ8C7I4 310 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Znhit2Q9QY66 399 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gipc1Q9Z0G0 333 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Pld1Q9Z280 1074 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Grem2O88273 168 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 CalrP14211 416 aaKnown RBP11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 OatP29758 439 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Cnnm3Q32NY4 713 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Rapgef1Q3UHC1 1224 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Lmx1aQ9JKU8 382 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Abcb11Q9QY30 1321 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Vps54Q5SPW0 977 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Hoxa13Q62424 386 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Tmtc4Q8BG19 741 aa11.11□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Celf1P28659 486 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Asprv1Q09PK2 339 aa11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Ubr7Q8BU04 425 aa11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Atxn7Q8R4I1 867 aa11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Gbp7Q91Z40 638 aa11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Pdxdc1Q99K01 787 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-202ENSMUST00000168162 Habp4Q9JKS5 411 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms