RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Myo6Q64331 1265 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tbc1d31Q6NXY1 996 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Efr3bQ6ZQ18 817 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Mphosph10Q810V0 681 aaKnown RBP8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Zdhhc1Q8R0N9 484 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Smc3Q9CW03 1217 aaKnown RBP8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Dcdc2cQ9D1B8 347 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Rufy3Q9D394 469 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Q9D9S1 216 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Rcan3Q9JKK0 239 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Stx6Q9JKK1 255 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Hmg20bQ9Z104 317 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 SisF8VQM5 1818 aa8.35□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Arrdc4A0A0B4J1F4 415 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Eddm13E9Q7F5 164 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Usp17ldG5E8G2 545 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Usp17lcG5E8I7 545 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Hoxb2P0C1T1 354 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Gadd45bP22339 160 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Cnnm1Q0GA42 951 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Psd3Q2PFD7 1037 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Slc4a10Q5DTL9 1118 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Adam1aQ60813 791 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Map3k2Q61083 619 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tgfb1i1Q62219 461 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Anp32cQ64G17 123 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tmem130Q6NXM3 419 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Krba1Q6NXZ1 1043 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Prkab2Q6PAM0 271 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Hapln4Q80WM4 400 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Tti2Q8BGV4 512 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Yipf4Q8C407 246 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Brf1Q8CFK2 676 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Cwf19l1Q8CI33 537 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Flad1Q8R123 492 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Zbtb3Q91X45 518 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 PhaxQ9JJT9 385 aaKnown RBP8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 PdcQ9QW08 244 aa8.34□□□□□ -1.07
Ccdc47-202ENSMUST00000106865 Exoc6bA6H5Z3 810 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Syce3B5KM66 88 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cntnap3E9PY62 1287 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tpm3P21107 285 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 EzrP26040 586 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ly6dP35459 127 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Sox5P35710 763 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Dnaja1P63037 397 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Znf692Q3U381 531 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nrg1Q6DR99 700 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Kif18bQ6PFD6 834 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gimap8Q75N62 688 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Aoc2Q812C9 757 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Znf592Q8BHZ4 1262 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tmem87bQ8BKU8 555 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 DrgxQ8BYH0 263 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cog5Q8C0L8 829 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Slc39a6Q8C145 765 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ttc27Q8CD92 847 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Naa30Q8CES0 364 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Atf7Q8R0S1 413 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Bmp2kQ91Z96 1138 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 NaspQ99MD9 773 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Jam3Q9D8B7 310 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rtp4Q9ER80 249 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ngly1Q9JI78 651 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cyp2ab1S4R196 498 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Psme4Q5SSW2 1843 aa8.33□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Sh3tc1G3X9F6 1346 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Skint7A7XV04 395 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zscan25B2RX31 543 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Eef2kO08796 724 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 AoahO35298 574 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Scamp3O35609 349 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 PnnO35691 725 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Atxn2O70305 1285 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Slc45a2P58355 530 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nlrp1aQ2LKU9 1182 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Asap3Q5U464 904 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Glg1Q61543 1175 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 ScapQ6GQT6 1276 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tex2Q6ZPJ0 1128 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ripor2Q80U16 1078 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Fam53cQ8BXQ8 393 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ccdc178Q8CDV0 866 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Kiaa1024Q8K3V7 917 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Pcolce2Q8R4W6 414 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Olfr127Q8VF25 323 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Bicc1Q99MQ1 977 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 BccipQ9CWI3 316 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 D930007J09RikQ9D2K6 131 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Prpf4Q9DAW6 521 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Myoz2Q9JJW5 264 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Mlh1Q9JK91 760 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Bag3Q9JLV1 577 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Igbp1bQ9QZ29 343 aa8.32□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Aox1O54754 1333 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Col6a3E9PWQ3 3284 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gm45140A0A0N4SUM8 220 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 GabreA2AMW3 916 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 NcapgE9PWG6 1004 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gm19402J3QJV4 266 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms