RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Trub2Q91WG3 331 aaKnown RBP16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Dnajc18Q9CZJ9 357 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Znf687Q9D2D7 1237 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Sbno2Q7TNB8 1349 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Cfap58B2RW38 873 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gm3095E9Q058 166 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Dhx15O35286 795 aaKnown RBP16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Rit2P70425 217 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Sox10Q04888 466 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Prpf4bQ61136 1007 aaKnown RBP16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mtss1lQ6P9S0 715 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Lmbrd1Q8K0B2 537 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Lrrc56Q8K375 552 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ifih1Q8R5F7 1025 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 NapaQ9DB05 295 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Rbp7Q9EPC5 134 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Plod3Q9R0E1 741 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Kcnh3Q9WVJ0 1095 aa16.58■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Wfdc16A2A5H4 111 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gm9992B2RWK3 458 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gm10134F6ZQC6 126 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Nr1i2O54915 431 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Atp9aO70228 1047 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Stra6O70491 670 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Hoxc6P10629 235 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 TxnP10639 105 aaKnown RBP16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Il4rP16382 810 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Nploc4P60670 608 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mettl14Q3UIK4 456 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Foxd1Q61345 456 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gpbp1Q6NXH3 473 aaKnown RBP16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Unc93aQ710D3 458 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Clec16aQ80U30 1036 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Tbx20Q9ES03 445 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Eif2ak1Q9Z2R9 619 aa16.57■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Dhtkd1A2ATU0 921 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ccdc78D3Z5T1 437 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Trdmt1O55055 415 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Pnma5Q5DTT8 618 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ppp2r5cQ60996 524 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Kcnk18Q6VV64 394 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ctdspl2Q8BG15 465 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Zdhhc14Q8BQQ1 489 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 GlmnQ8BZM1 596 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Zfp202Q8C879 641 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ces4aQ8R0W5 563 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 RragcQ99K70 398 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gimap3Q99MI6 301 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 FibpQ9JI19 357 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Pex3Q9QXY9 372 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Slc26a4Q9R155 780 aa16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Twf2Q9Z0P5 349 aaKnown RBP16.56■□□□□ 0.24
Ercc1-201ENSMUST00000003645 AW822073A0A0N4SUK1 652 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 TazI7HJS2 263 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 NfkbieO54910 364 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 NfiaQ02780 532 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Fscn2Q32M02 492 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Pex1Q5BL07 1284 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Olfr832Q7TRG9 312 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Tbc1d22bQ80VE5 505 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 H2-Q4Q8HWB2 354 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Fgd4Q91ZT5 766 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mipol1Q9D9F8 279 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cntn6Q9JMB8 1028 aa16.55■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Kansl3A2RSY1 903 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Atp8b5A3FIN4 1183 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Serpina16D3Z660 418 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Krt78E9Q0F0 1068 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gm38392E9Q2A2 434 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 LtkP08923 888 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Psmc4P54775 418 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Rnf207Q3V3A7 635 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ece1Q4PZA2 769 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Dph1Q5NCQ5 438 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 A1cfQ5YD48 595 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 PicalmQ7M6Y3 660 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Dusp9Q7TNL7 452 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mcph1Q7TT79 822 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Tdp1Q8BJ37 609 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Rec8Q8C5S7 591 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Bclaf1Q8K019 919 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 E2f4Q8R0K9 410 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cabp7Q91ZM8 215 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Med24Q99K74 987 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Vwa5aQ99KC8 793 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Polr2dQ9D7M8 142 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ralgps2Q9ERD6 590 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Sgpp1Q9JI99 430 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Add3Q9QYB5 706 aaKnown RBP16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 BcamQ9R069 622 aa16.54■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cpb1B2RS76 415 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Pdzrn4E9PUZ9 1014 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mcm4P49717 862 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Muc1Q02496 630 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Rasip1Q3U0S6 961 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Gas7Q60780 421 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cln3Q61124 438 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Slc17a8Q8BFU8 601 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Sun2Q8BJS4 731 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Tmx3Q8BXZ1 456 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms