RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C DOT6P40059 670 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C RTT105P40063 208 aa3.98□□□□□ -1.77
PTA1YAL043C BST1P43571 1029 aa3.98□□□□□ -1.77
PTA1YAL043C MPS3P47069 682 aa3.98□□□□□ -1.77
PTA1YAL043C RAI1P53063 387 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C YNL095CP53932 642 aa3.98□□□□□ -1.77
PTA1YAL043C PEX13P80667 386 aa3.98□□□□□ -1.77
PTA1YAL043C NHP10Q03435 203 aa3.98□□□□□ -1.77
PTA1YAL043C BRE4Q07660 1125 aa3.98□□□□□ -1.77
PTA1YAL043C GRC3Q07845 632 aa3.98□□□□□ -1.77
PTA1YAL043C LDB18Q07887 179 aa3.98□□□□□ -1.77
PTA1YAL043C NOP12Q08208 459 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C GSH2Q08220 491 aa3.98□□□□□ -1.77
PTA1YAL043C RSA1Q08932 381 aa3.98□□□□□ -1.77
PTA1YAL043C YDR056CQ12025 205 aa3.98□□□□□ -1.77
PTA1YAL043C ICT1Q12385 394 aa3.98□□□□□ -1.77
PTA1YAL043C YIL002W-AQ3E7Z5 69 aa3.98□□□□□ -1.77
PTA1YAL043C HEM1P09950 548 aaPredicted RBP3.97□□□□□ -1.77
PTA1YAL043C DBR1P24309 405 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C CSM1P25651 190 aa3.97□□□□□ -1.77
PTA1YAL043C COX13P32799 129 aa3.97□□□□□ -1.77
PTA1YAL043C IMP3P32899 183 aaPredicted RBP3.97□□□□□ -1.77
PTA1YAL043C RFS1P38234 210 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C PET100P38958 111 aa3.97□□□□□ -1.77
PTA1YAL043C EXO1P39875 702 aa3.97□□□□□ -1.77
PTA1YAL043C YEN1P40028 759 aa3.97□□□□□ -1.77
PTA1YAL043C THO1P40040 218 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C YTA6P40328 754 aa3.97□□□□□ -1.77
PTA1YAL043C KTR7P40504 517 aa3.97□□□□□ -1.77
PTA1YAL043C AZF1P41696 914 aa3.97□□□□□ -1.77
PTA1YAL043C GCD10P41814 478 aa3.97□□□□□ -1.77
PTA1YAL043C YJR124CP47159 448 aa3.97□□□□□ -1.77
PTA1YAL043C GTO1P48239 356 aa3.97□□□□□ -1.77
PTA1YAL043C EMC4P53073 190 aa3.97□□□□□ -1.77
PTA1YAL043C CAF120P53836 1060 aa3.97□□□□□ -1.77
PTA1YAL043C YML131WQ03102 365 aa3.97□□□□□ -1.77
PTA1YAL043C ERB1Q04660 807 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C BCH1Q05029 724 aa3.97□□□□□ -1.77
PTA1YAL043C BLS1Q06071 122 aa3.97□□□□□ -1.77
PTA1YAL043C EMG1Q06287 252 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C RSC3Q06639 885 aa3.97□□□□□ -1.77
PTA1YAL043C GRS2Q06817 618 aa3.97□□□□□ -1.77
PTA1YAL043C YOR352WQ08816 343 aa3.97□□□□□ -1.77
PTA1YAL043C SOG2Q08817 791 aa3.97□□□□□ -1.77
PTA1YAL043C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PTA1YAL043C SVS1Q12254 260 aa3.97□□□□□ -1.77
PTA1YAL043C SUT2Q12286 268 aa3.97□□□□□ -1.77
PTA1YAL043C LPX1Q12405 387 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C SRN2Q99176 213 aa3.97□□□□□ -1.77
PTA1YAL043C LEU4P06208 619 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C ENA1P13587 1091 aa3.97□□□□□ -1.77
PTA1YAL043C CLN2P20438 545 aa3.97□□□□□ -1.77
PTA1YAL043C VPS33P20795 691 aa3.97□□□□□ -1.77
PTA1YAL043C GRR1P24814 1151 aa3.97□□□□□ -1.77
PTA1YAL043C RER1P25560 188 aa3.97□□□□□ -1.77
PTA1YAL043C RNP1P32385 249 aa3.97□□□□□ -1.77
PTA1YAL043C VPH1P32563 840 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C PPG1P32838 368 aa3.97□□□□□ -1.77
PTA1YAL043C APD1P38281 316 aa3.97□□□□□ -1.77
PTA1YAL043C GDI1P39958 451 aaKnown RBP3.97□□□□□ -1.77
PTA1YAL043C HAT2P39984 401 aa3.97□□□□□ -1.77
PTA1YAL043C FMP10P40098 244 aa3.97□□□□□ -1.77
PTA1YAL043C ATP22P50273 684 aaPredicted RBP3.97□□□□□ -1.77
PTA1YAL043C SPC105P53148 917 aa3.97□□□□□ -1.77
PTA1YAL043C ENA2Q01896 1091 aa3.97□□□□□ -1.77
PTA1YAL043C RSC9Q03124 581 aa3.97□□□□□ -1.77
PTA1YAL043C PIR3Q03180 325 aa3.97□□□□□ -1.77
PTA1YAL043C TFB3Q03290 321 aa3.97□□□□□ -1.77
PTA1YAL043C EMI1Q04406 187 aa3.97□□□□□ -1.77
PTA1YAL043C RRN11Q04712 507 aa3.97□□□□□ -1.77
PTA1YAL043C RAD34Q06665 692 aa3.97□□□□□ -1.77
PTA1YAL043C YIG1Q08956 461 aa3.97□□□□□ -1.77
PTA1YAL043C LEA1Q08963 238 aaPredicted RBP3.97□□□□□ -1.77
PTA1YAL043C TY3A-GQ12173 290 aa3.97□□□□□ -1.77
PTA1YAL043C JLP1Q12358 412 aa3.97□□□□□ -1.77
PTA1YAL043C ENA5Q12691 1091 aa3.97□□□□□ -1.77
PTA1YAL043C TY3A-IQ99219 290 aa3.97□□□□□ -1.77
PTA1YAL043C RPS9AO13516 197 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C HXK2P04807 486 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C EMC1P25574 760 aa3.96□□□□□ -1.78
PTA1YAL043C KRR1P25586 316 aaPredicted RBP3.96□□□□□ -1.78
PTA1YAL043C COS111P38308 924 aa3.96□□□□□ -1.78
PTA1YAL043C YBR225WP38321 900 aa3.96□□□□□ -1.78
PTA1YAL043C SFB3P38810 929 aa3.96□□□□□ -1.78
PTA1YAL043C KRE29P40026 464 aa3.96□□□□□ -1.78
PTA1YAL043C SOK1P40317 901 aa3.96□□□□□ -1.78
PTA1YAL043C UFE1P41834 346 aa3.96□□□□□ -1.78
PTA1YAL043C IRC5P43610 853 aa3.96□□□□□ -1.78
PTA1YAL043C BPL1P48445 690 aaPredicted RBP3.96□□□□□ -1.78
PTA1YAL043C BIO3P50277 480 aa3.96□□□□□ -1.78
PTA1YAL043C CWC23P52868 283 aaPredicted RBP3.96□□□□□ -1.78
PTA1YAL043C IMA1P53051 589 aa3.96□□□□□ -1.78
PTA1YAL043C COP1P53622 1201 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C YNL143CP53908 130 aa3.96□□□□□ -1.78
PTA1YAL043C EFM6P53970 246 aa3.96□□□□□ -1.78
PTA1YAL043C UGO1Q03327 502 aa3.96□□□□□ -1.78
PTA1YAL043C YDR444WQ04093 687 aa3.96□□□□□ -1.78
PTA1YAL043C DBP9Q06218 594 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C FMP45Q07651 309 aa3.96□□□□□ -1.78
PTA1YAL043C RPN5Q12250 445 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms