RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MKL1Q969V6 931 aa19.66■□□□□ 0.74
PHGDH-234ENST00000642041 CCDC34Q96HJ3 373 aa19.66■□□□□ 0.74
PHGDH-234ENST00000642041 MYL10Q9BUA6 226 aa19.66■□□□□ 0.74
PHGDH-234ENST00000642041 NYAP2Q9P242 653 aa19.66■□□□□ 0.74
PHGDH-234ENST00000642041 SCG2P13521 617 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 RXRAP19793 462 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 DEKP35659 375 aaKnown RBP19.65■□□□□ 0.74
PHGDH-234ENST00000642041 KRT2P35908 639 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 CCNA1P78396 465 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 FUT2Q10981 343 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 ZSCAN23Q3MJ62 389 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 CERKLQ49MI3 558 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-234ENST00000642041 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.65■□□□□ 0.74
PHGDH-234ENST00000642041 DNAJC18Q9H819 358 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 V9GY48 417 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-234ENST00000642041 CHD9Q3L8U1 2897 aa19.65■□□□□ 0.74
PHGDH-234ENST00000642041 MUC6Q6W4X9 2439 aa19.64■□□□□ 0.74
PHGDH-234ENST00000642041 IGKV6D-41A0A0C4DH26 115 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 FSD2A1L4K1 749 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 IGHA2P01877 340 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 CYBAP13498 195 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 PTPREP23469 700 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 CYP2C19P33261 490 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 TLE2Q04725 743 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 ANO1Q5XXA6 986 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 MCTP2Q6DN12 878 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 CCDC73Q6ZRK6 1079 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 LRFN3Q9BTN0 628 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 SEC63Q9UGP8 760 aaKnown RBP19.64■□□□□ 0.73
PHGDH-234ENST00000642041 RABGAP1Q9Y3P9 1069 aa19.64■□□□□ 0.73
PHGDH-234ENST00000642041 TCF20Q9UGU0 1960 aaKnown RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 MYH6P13533 1939 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 MYH15Q9Y2K3 1946 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 USP17L10C9JJH3 530 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 SPTLC2O15270 562 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 ASNSP08243 561 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 GNA11P29992 359 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 ADCYAP1R1P41586 468 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 SLC39A14Q15043 492 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 FOXD4L6Q3SYB3 417 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 FOXD4L3Q6VB84 417 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 DIS3L2Q8IYB7 885 aaKnown RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 LINC00301Q8NCQ3 95 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 NPLOC4Q8TAT6 608 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 BICD2Q8TD16 824 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 RRP36Q96EU6 259 aaKnown RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 PHF20Q9BVI0 1012 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 PRDM12Q9H4Q4 367 aa19.63■□□□□ 0.73
PHGDH-234ENST00000642041 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
PHGDH-234ENST00000642041 XIRP2A4UGR9 3374 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 CNTNAP5Q8WYK1 1306 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 KIAA0355O15063 1070 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 CLTBP09497 229 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 FPGSQ05932 587 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 RAB11FIP4Q86YS3 637 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 CEP95Q96GE4 821 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 NECAB3Q96P71 396 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-234ENST00000642041 PYM1Q9BRP8 204 aaKnown RBP19.62■□□□□ 0.73
PHGDH-234ENST00000642041 SH2D4AQ9H788 454 aa19.62■□□□□ 0.73
PHGDH-234ENST00000642041 KLRF2D3W0D1 207 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 MPHOSPH10O00566 681 aaKnown RBP19.61■□□□□ 0.73
PHGDH-234ENST00000642041 CNMDO75829 334 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 SNHG28P0DPA3 235 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 BMP1P13497 986 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 AKR1B1P15121 316 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 RAG1P15918 1043 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 ME1P48163 572 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 GUCY1B3Q02153 619 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 ORC2Q13416 577 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-234ENST00000642041 GRB14Q14449 540 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 CCDC85BQ15834 202 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-234ENST00000642041 ABCB5Q2M3G0 1257 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 SRBD1Q8N5C6 995 aaKnown RBP19.61■□□□□ 0.73
PHGDH-234ENST00000642041 DCAF4Q8WV16 495 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 FERMT2Q96AC1 680 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 USP28Q96RU2 1077 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 GDPD2Q9HCC8 539 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 MAD2L2Q9UI95 211 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 IVNS1ABPQ9Y6Y0 642 aa19.61■□□□□ 0.73
PHGDH-234ENST00000642041 GREB1LQ9C091 1923 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-234ENST00000642041 SEPT4O43236 478 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 NMT2O60551 498 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 NLRP5P59047 1200 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 ADGRE1Q14246 886 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 LRRC41Q15345 812 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 PKN1Q16512 942 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 WDR78Q5VTH9 848 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 PPP1R18Q6NYC8 613 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 ZNF579Q8NAF0 562 aaKnown RBP19.6■□□□□ 0.73
PHGDH-234ENST00000642041 DAGLBQ8NCG7 672 aa19.6■□□□□ 0.73
PHGDH-234ENST00000642041 CXXC1Q9P0U4 656 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-234ENST00000642041 HOOK1Q9UJC3 728 aaKnown RBP19.6■□□□□ 0.73
PHGDH-234ENST00000642041 ESYT2A0FGR8 921 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 MYCNP04198 464 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-234ENST00000642041 CMA1P23946 247 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 ELOA2Q8IYF1 753 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-234ENST00000642041 PBX4Q9BYU1 374 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 NUP62CLQ9H1M0 184 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms