RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 WDFY4Q6ZS81 3184 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 BAZ2AQ9UIF9 1905 aaKnown RBP11.55□□□□□ -0.56
PHGDH-212ENST00000641247 NFIBO00712 420 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 TTLL1O95922 423 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 SELPP16109 830 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 STAT2P52630 851 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-212ENST00000641247 HIC1Q14526 733 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
PHGDH-212ENST00000641247 EPC2Q52LR7 807 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 EP400NLQ6ZTU2 488 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 LRRC8DQ7L1W4 858 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 ADHFE1Q8IWW8 467 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
PHGDH-212ENST00000641247 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 HAUS7Q99871 368 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 PRR12Q9ULL5 1215 aa11.55□□□□□ -0.56
PHGDH-212ENST00000641247 ABHD14A-ACY1A0A1B0GW23 586 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 LGR5O75473 907 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 FDX1P10109 184 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 CKBP12277 381 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 ATP5JP18859 108 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-212ENST00000641247 CLUL1Q15846 466 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 TRIM71Q2Q1W2 868 aaKnown RBP11.54□□□□□ -0.56
PHGDH-212ENST00000641247 HERC4Q5GLZ8 1057 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-212ENST00000641247 TTBK2Q6IQ55 1244 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-212ENST00000641247 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 CAGE1Q8TC20 777 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-212ENST00000641247 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 INCENPQ9NQS7 918 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 PRKAG3Q9UGI9 489 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 NOD1Q9Y239 953 aa11.54□□□□□ -0.56
PHGDH-212ENST00000641247 H3BNC9 293 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 IFIT2P09913 472 aaKnown RBP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 SLC1A4P43007 532 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 HTRA4P83105 476 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 ZNF200P98182 395 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 RBL2Q08999 1139 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 GPM6BQ13491 265 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 SLC30A10Q6XR72 485 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 FAM160B2Q86V87 743 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 CLASRPQ8N2M8 674 aaKnown RBP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 CLEC4DQ8WXI8 215 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 EDAQ92838 391 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
PHGDH-212ENST00000641247 ZNF318Q5VUA4 2279 aa11.53□□□□□ -0.56
PHGDH-212ENST00000641247 USP34Q70CQ2 3546 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 MBTPS2O43462 519 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 NMT2O60551 498 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 PLA2G6O60733 806 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 EDNRBP24530 442 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 SLC16A2P36021 539 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 TFAP4Q01664 338 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
PHGDH-212ENST00000641247 CTC1Q2NKJ3 1217 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 RCSD1Q6JBY9 416 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 BMP8AQ7Z5Y6 402 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 RPAINQ86UA6 219 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 SESTD1Q86VW0 696 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 DBF4BQ8NFT6 615 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 AFG1LQ8WV93 481 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.52□□□□□ -0.571e-14■□□□□ 11
PHGDH-212ENST00000641247 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
PHGDH-212ENST00000641247 LCTP09848 1927 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 LINC01565O15544 149 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 GFRA3O60609 400 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 KPNA6O60684 536 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 ICAM1P05362 532 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 MMP3P08254 477 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 TXNP10599 105 aaKnown RBP11.51□□□□□ -0.57
PHGDH-212ENST00000641247 CALML3P27482 149 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 PTPN5P54829 565 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 IKQ13123 557 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-212ENST00000641247 IKBKEQ14164 716 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 TRIM67Q6ZTA4 783 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms