RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 TLK2Q86UE8 772 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 COL20A1Q9P218 1284 aa11.65□□□□□ -0.54
KCNMA1-280ENST00000640311 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 MYCLP12524 364 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 SMPD1P17405 629 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 ACLYP53396 1101 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 GJA9P57773 515 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 KCNA10Q16322 511 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 SLC39A5Q6ZMH5 540 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 HEATR3Q7Z4Q2 680 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 SAMD3Q8N6K7 520 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 PCSK9Q8NBP7 692 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 CUL5Q93034 780 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 ZSWIM6Q9HCJ5 1215 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 PXMP2Q9NR77 195 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 PHF24Q9UPV7 400 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
KCNMA1-280ENST00000640311 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 A0A1W2PQ45 241 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 A0A1W2PQY0 241 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 ASGR1P07306 291 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 NR3C2P08235 984 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 SYN1P17600 705 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 PTGS1P23219 599 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 EDNRBP24530 442 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 CDC27P30260 824 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 ADD1P35611 737 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 BEX3Q00994 111 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 PPP2R5BQ15173 497 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 SCFD2Q8WU76 684 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 TM6SF1Q9BZW5 370 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 ZMYND8Q9ULU4 1186 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 V9GY48 417 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 SMCHD1A6NHR9 2005 aa11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-280ENST00000640311 ZEB2O60315 1214 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 EIF3JO75822 258 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 CST5P28325 142 aaPredicted RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 RCAN1P53805 252 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 RTP1P59025 263 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 TTLL4Q14679 1199 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 PGM5Q15124 567 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 USP17L6PQ6QN14 398 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 FBXL16Q8N461 479 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 KLHDC9Q8NEP7 349 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 OR6J1Q8NGC5 347 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 UPF3AQ9H1J1 476 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 PSTPIP2Q9H939 334 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 PRKAG2Q9UGJ0 569 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 Q9Y3F1 56 aa11.62□□□□□ -0.55
KCNMA1-280ENST00000640311 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 CCND2P30279 289 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 CPT1AP50416 773 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 NAPAP54920 295 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 GHRHRQ02643 423 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 TOB2Q14106 344 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 LY6KQ17RY6 165 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 TRIM60Q495X7 471 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 BRDTQ58F21 947 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 CCSAPQ6IQ19 270 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 PRDM5Q9NQX1 630 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 FAM217BQ9NTX9 383 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 MRVI1Q9Y6F6 885 aa11.61□□□□□ -0.55
KCNMA1-280ENST00000640311 LCTP09848 1927 aa11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 MYH6P13533 1939 aa11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 SPDYE3A6NKU9 549 aa11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 MEIS2O14770 477 aa11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 PQBP1O60828 265 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
KCNMA1-280ENST00000640311 SEC24BO95487 1268 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms