RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 WDR87Q6ZQQ6 2873 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 CKBP12277 381 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 NBL1P41271 181 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
PTP4A1-207ENST00000639568 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 A6NJR5 290 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 NDUFV1P49821 464 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 HYAL1Q12794 435 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 LRRC47Q8N1G4 583 aaKnown RBP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 EAF2Q96CJ1 260 aaPredicted RBP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 MKNK2Q9HBH9 465 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
PTP4A1-207ENST00000639568 MED19A0JLT2 244 aaPredicted RBP13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 LGR5O75473 907 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 MBD4O95243 580 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 BMP3P12645 472 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 STAT2P52630 851 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 PDE4BQ07343 736 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
PTP4A1-207ENST00000639568 TBX10O75333 385 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 UPP2O95045 317 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 CTNNB1P35222 781 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 RBL2Q08999 1139 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 POLA2Q14181 598 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 ZBTB33Q86T24 672 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 DHX38Q92620 1227 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 C11orf84Q9BUA3 381 aaPredicted RBP13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 MCM3APO60318 1980 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
PTP4A1-207ENST00000639568 VPS13AQ96RL7 3174 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 GOLIM4O00461 696 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 BCAR3O75815 825 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 PDE4DQ08499 809 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 AACSQ86V21 672 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 DMDP11532 3685 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 SIP14410 1827 aa13.11□□□□□ -0.31
PTP4A1-207ENST00000639568 LOC102724159A0A0B4J2E5 919 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 LINC01565O15544 149 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 CSPG5O95196 566 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 EYA4O95677 639 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 RB1P06400 928 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 RASA1P20936 1047 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 PTK7Q13308 1070 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 ADAM15Q13444 863 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 PWP2Q15269 919 aaKnown RBP13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 ZNF618Q5T7W0 954 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 FIBCD1Q8N539 461 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 TOP1MTQ969P6 601 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 MKL1Q969V6 931 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms